RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W OPI1P21957 404 aa3.92□□□□□ -1.78
NUP60YAR002W RVS167P39743 482 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W CIR1P42940 261 aa3.92□□□□□ -1.78
NUP60YAR002W NUT1P53114 1132 aa3.92□□□□□ -1.78
NUP60YAR002W YGL081WP53156 320 aa3.92□□□□□ -1.78
NUP60YAR002W BIO5P53744 561 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W ALD3P54114 506 aa3.92□□□□□ -1.78
NUP60YAR002W RAT1Q02792 1006 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W PMT7Q06644 662 aa3.92□□□□□ -1.78
NUP60YAR002W RRI2Q12348 645 aa3.92□□□□□ -1.78
NUP60YAR002W PIF1P07271 859 aa3.92□□□□□ -1.78
NUP60YAR002W YMR147WP40218 223 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W GUP1P53154 560 aa3.92□□□□□ -1.78
NUP60YAR002W UTP22P53254 1237 aaPredicted RBP3.92□□□□□ -1.78
NUP60YAR002W DAL4Q04895 635 aa3.92□□□□□ -1.78
NUP60YAR002W SVF1Q05515 481 aa3.92□□□□□ -1.78
NUP60YAR002W DIB1Q06819 143 aaPredicted RBP3.92□□□□□ -1.78
NUP60YAR002W SOG2Q08817 791 aa3.92□□□□□ -1.78
NUP60YAR002W GLO4Q12320 285 aa3.92□□□□□ -1.78
NUP60YAR002W AIM44Q99299 758 aa3.92□□□□□ -1.78
NUP60YAR002W MRP10O75012 95 aa3.91□□□□□ -1.78
NUP60YAR002W MET1P36150 593 aa3.91□□□□□ -1.78
NUP60YAR002W RSM25P40496 264 aa3.91□□□□□ -1.78
NUP60YAR002W VID28P40547 921 aa3.91□□□□□ -1.78
NUP60YAR002W LEM3P42838 414 aa3.91□□□□□ -1.78
NUP60YAR002W LYS4P49367 693 aaPredicted RBP3.91□□□□□ -1.78
NUP60YAR002W CTF18P49956 741 aa3.91□□□□□ -1.78
NUP60YAR002W PEX14P53112 341 aa3.91□□□□□ -1.78
NUP60YAR002W MON1P53129 644 aa3.91□□□□□ -1.78
NUP60YAR002W ARP5P53946 755 aa3.91□□□□□ -1.78
NUP60YAR002W PEX19Q07418 342 aa3.91□□□□□ -1.78
NUP60YAR002W CTI6Q08923 506 aa3.91□□□□□ -1.78
NUP60YAR002W PGA3Q12746 312 aaKnown RBP3.91□□□□□ -1.78
NUP60YAR002W LAM4P38800 1345 aa3.9□□□□□ -1.78
NUP60YAR002W NPR1P22211 790 aa3.9□□□□□ -1.79
NUP60YAR002W PEP3P27801 918 aa3.9□□□□□ -1.79
NUP60YAR002W MCM2P29469 868 aa3.9□□□□□ -1.79
NUP60YAR002W RPN12P32496 274 aa3.9□□□□□ -1.79
NUP60YAR002W DUR3P33413 735 aa3.9□□□□□ -1.79
NUP60YAR002W PRX1P34227 261 aaKnown RBP3.9□□□□□ -1.79
NUP60YAR002W RKM3P38222 552 aa3.9□□□□□ -1.79
NUP60YAR002W RIM11P38615 370 aa3.9□□□□□ -1.79
NUP60YAR002W RPS26AP39938 119 aaKnown RBP3.9□□□□□ -1.79
NUP60YAR002W RPS26BP39939 119 aaKnown RBP3.9□□□□□ -1.79
NUP60YAR002W FYV10P40492 516 aa3.9□□□□□ -1.79
NUP60YAR002W ENP2P48234 707 aaKnown RBP3.9□□□□□ -1.79
NUP60YAR002W PIL1P53252 339 aaKnown RBP3.9□□□□□ -1.79
NUP60YAR002W YAF9P53930 226 aa3.9□□□□□ -1.79
NUP60YAR002W LCD1Q04377 747 aa3.9□□□□□ -1.79
NUP60YAR002W THI3Q07471 609 aa3.9□□□□□ -1.79
NUP60YAR002W CPA2P03965 1118 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W HXK1P04806 485 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W MATALPHA2P0CY08 210 aa3.89□□□□□ -1.79
NUP60YAR002W HMLALPHA2P0CY09 210 aa3.89□□□□□ -1.79
NUP60YAR002W MBR1P23493 339 aa3.89□□□□□ -1.79
NUP60YAR002W MCM5P29496 775 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W MGM1P32266 881 aa3.89□□□□□ -1.79
NUP60YAR002W IMP2'P32351 346 aa3.89□□□□□ -1.79
NUP60YAR002W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
NUP60YAR002W TFA2P36145 328 aa3.89□□□□□ -1.79
NUP60YAR002W PAM1P37304 830 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W AMN1P38285 549 aaPredicted RBP3.89□□□□□ -1.79
NUP60YAR002W YHL017WP38745 532 aa3.89□□□□□ -1.79
NUP60YAR002W NUG1P40010 520 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W MRPS18P42847 217 aa3.89□□□□□ -1.79
NUP60YAR002W YJR124CP47159 448 aa3.89□□□□□ -1.79
NUP60YAR002W YKE2P52553 114 aa3.89□□□□□ -1.79
NUP60YAR002W RSC1P53236 928 aa3.89□□□□□ -1.79
NUP60YAR002W SOK2P53438 785 aaPredicted RBP3.89□□□□□ -1.79
NUP60YAR002W SYF1Q04048 859 aaPredicted RBP3.89□□□□□ -1.79
NUP60YAR002W ESF1Q06344 628 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W BDF2Q07442 638 aa3.89□□□□□ -1.79
NUP60YAR002W RIX7Q07844 837 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W PSK2Q08217 1101 aa3.89□□□□□ -1.79
NUP60YAR002W ELG1Q12050 791 aa3.89□□□□□ -1.79
NUP60YAR002W YPL150WQ12152 901 aa3.89□□□□□ -1.79
NUP60YAR002W SSF2Q12153 453 aaPredicted RBP3.89□□□□□ -1.79
NUP60YAR002W TAH18Q12181 623 aa3.89□□□□□ -1.79
NUP60YAR002W SLP1Q12232 587 aa3.89□□□□□ -1.79
NUP60YAR002W CMR1Q12510 522 aaKnown RBP3.89□□□□□ -1.79
NUP60YAR002W HVG1P0CE11 249 aa3.88□□□□□ -1.79
NUP60YAR002W CYC8P14922 966 aa3.88□□□□□ -1.79
NUP60YAR002W PEP7P32609 515 aa3.88□□□□□ -1.79
NUP60YAR002W ELM1P32801 640 aa3.88□□□□□ -1.79
NUP60YAR002W ALG14P38242 237 aa3.88□□□□□ -1.79
NUP60YAR002W TOS1P38288 455 aa3.88□□□□□ -1.79
NUP60YAR002W FAA3P39002 694 aa3.88□□□□□ -1.79
NUP60YAR002W ICP55P40051 511 aa3.88□□□□□ -1.79
NUP60YAR002W FET4P40988 552 aa3.88□□□□□ -1.79
NUP60YAR002W IRC8P47046 822 aa3.88□□□□□ -1.79
NUP60YAR002W ENT3P47160 408 aa3.88□□□□□ -1.79
NUP60YAR002W CTH1P47976 325 aa3.88□□□□□ -1.79
NUP60YAR002W YNR065CP53751 1116 aa3.88□□□□□ -1.79
NUP60YAR002W ULP1Q02724 621 aa3.88□□□□□ -1.79
NUP60YAR002W GIS4Q04233 774 aa3.88□□□□□ -1.79
NUP60YAR002W TOS4Q06266 489 aa3.88□□□□□ -1.79
NUP60YAR002W MCD1Q12158 566 aa3.88□□□□□ -1.79
NUP60YAR002W CYB2P00175 591 aa3.88□□□□□ -1.79
NUP60YAR002W FRS2P15625 503 aaKnown RBP3.88□□□□□ -1.79
NUP60YAR002W NAR1P23503 491 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms