RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
ATRX-219ENST00000625063 MIA2Q96PC5 1412 aa9.14□□□□□ -0.95
ATRX-219ENST00000625063 SYNMO15061 1565 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 UGGT1Q9NYU2 1555 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 UBTFP17480 764 aaKnown RBP9.13□□□□□ -0.95
ATRX-219ENST00000625063 TMPRSS4Q9NRS4 437 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 IQGAP1P46940 1657 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 DEPDC5O75140 1603 aa9.13□□□□□ -0.95
ATRX-219ENST00000625063 WASHC2CQ9Y4E1 1318 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 TERTO14746 1132 aaKnown RBP9.12□□□□□ -0.95
ATRX-219ENST00000625063 KIF3BO15066 747 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 VEGFBP49765 207 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 EEA1Q15075 1411 aa9.12□□□□□ -0.95
ATRX-219ENST00000625063 PZPP20742 1482 aa9.11□□□□□ -0.95
ATRX-219ENST00000625063 NLRP1Q9C000 1473 aa9.11□□□□□ -0.95
ATRX-219ENST00000625063 ARHGAP35Q9NRY4 1499 aa9.11□□□□□ -0.95
ATRX-219ENST00000625063 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
ATRX-219ENST00000625063 CFDP1Q9UEE9 299 aaPredicted RBP9.11□□□□□ -0.95
ATRX-219ENST00000625063 ERVH48-1M5A8F1 160 aa9.1□□□□□ -0.95
ATRX-219ENST00000625063 UPP2O95045 317 aa9.1□□□□□ -0.95
ATRX-219ENST00000625063 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
ATRX-219ENST00000625063 KIAA1107Q9UPP5 1409 aa9.1□□□□□ -0.95
ATRX-219ENST00000625063 INO80Q9ULG1 1556 aaPredicted RBP9.1□□□□□ -0.95
ATRX-219ENST00000625063 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
ATRX-219ENST00000625063 DHX29Q7Z478 1369 aaKnown RBP9.1□□□□□ -0.95
ATRX-219ENST00000625063 ESPNB1AK53 854 aa9.09□□□□□ -0.95
ATRX-219ENST00000625063 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 ZNF772Q68DY9 489 aaPredicted RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 Q6ZVU0 165 aa9.09□□□□□ -0.95
ATRX-219ENST00000625063 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 TSEN34Q9BSV6 310 aaKnown RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
ATRX-219ENST00000625063 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
ATRX-219ENST00000625063 LRRIQ1Q96JM4 1722 aa9.08□□□□□ -0.96
ATRX-219ENST00000625063 WIPF1O43516 503 aa9.08□□□□□ -0.96
ATRX-219ENST00000625063 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
ATRX-219ENST00000625063 RXRBP28702 533 aa9.08□□□□□ -0.96
ATRX-219ENST00000625063 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
ATRX-219ENST00000625063 NXF1Q9UBU9 619 aaKnown RBP9.08□□□□□ -0.96
ATRX-219ENST00000625063 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
ATRX-219ENST00000625063 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 MAN1A2O60476 641 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 RELBQ01201 579 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 NR1H3Q13133 447 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 TXNDC2Q86VQ3 553 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 DNMT3LQ9UJW3 386 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 JCADQ9P266 1359 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
ATRX-219ENST00000625063 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
ATRX-219ENST00000625063 LILRA1O75019 489 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 LTKP29376 864 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 PROSER2Q86WR7 435 aaPredicted RBP9.06□□□□□ -0.96
ATRX-219ENST00000625063 CYLDQ9NQC7 956 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 TMEM94Q12767 1356 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 CCNB3Q8WWL7 1395 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 CCDC18Q5T9S5 1454 aa9.06□□□□□ -0.96
ATRX-219ENST00000625063 ZNF644Q9H582 1327 aaPredicted RBP9.05□□□□□ -0.96
ATRX-219ENST00000625063 ROBO1Q9Y6N7 1651 aa9.05□□□□□ -0.96
ATRX-219ENST00000625063 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
ATRX-219ENST00000625063 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
ATRX-219ENST00000625063 SCAF11Q99590 1463 aaKnown RBP9.04□□□□□ -0.96
ATRX-219ENST00000625063 FIGNL2A6NMB9 653 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 APBB1O00213 710 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
ATRX-219ENST00000625063 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 RTEL1-TNFRSF6BF6WH68 1400 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 CASKIN1Q8WXD9 1431 aa9.04□□□□□ -0.96
ATRX-219ENST00000625063 ZC3H13Q5T200 1668 aaKnown RBP9.04□□□□□ -0.96
ATRX-219ENST00000625063 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
ATRX-219ENST00000625063 H3BM21 787 aa9.03□□□□□ -0.96
ATRX-219ENST00000625063 SPINT1O43278 529 aa9.03□□□□□ -0.96
ATRX-219ENST00000625063 KCNA6P17658 529 aa9.03□□□□□ -0.96
ATRX-219ENST00000625063 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
ATRX-219ENST00000625063 LOC100996750A0A140TA64 210 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 CTSOP43234 321 aaPredicted RBP9.02□□□□□ -0.97
ATRX-219ENST00000625063 IRF5Q13568 498 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 KDF1Q8NAX2 398 aaPredicted RBP9.02□□□□□ -0.97
ATRX-219ENST00000625063 KRTAP4-6Q9BYQ5 205 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 SPATA31A6Q5VVP1 1343 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 LRRC9Q6ZRR7 1453 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 LRP6O75581 1613 aa9.02□□□□□ -0.97
ATRX-219ENST00000625063 PHLPP1O60346 1717 aa9.01□□□□□ -0.97
ATRX-219ENST00000625063 ADH1AP07327 375 aa9.01□□□□□ -0.97
ATRX-219ENST00000625063 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
ATRX-219ENST00000625063 MBD5Q9P267 1494 aa9.01□□□□□ -0.97
ATRX-219ENST00000625063 SLC26A8Q96RN1 970 aa9□□□□□ -0.97
ATRX-219ENST00000625063 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
ATRX-219ENST00000625063 MSH6P52701 1360 aa8.99□□□□□ -0.97
ATRX-219ENST00000625063 GMPRP36959 345 aa8.99□□□□□ -0.97
ATRX-219ENST00000625063 MCM6Q14566 821 aa8.99□□□□□ -0.97
ATRX-219ENST00000625063 POLMQ9NP87 494 aaPredicted RBP8.99□□□□□ -0.97
ATRX-219ENST00000625063 ERVK-7P63135 1459 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms