RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 THEMISQ8N1K5 641 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 SDF4Q9BRK5 362 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 ZMYM3Q14202 1370 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 MROH1Q8NDA8 1641 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 CPLX1O14810 134 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 APPP05067 770 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 WASHC4Q2M389 1173 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 MAP3K2Q9Y2U5 619 aa8.18□□□□□ -1.1
SYNPO2-206ENST00000610556 NUP62CLQ9H1M0 184 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 YEATS2Q9ULM3 1422 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 NPHP1O15259 732 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 ECHDC1Q9NTX5 307 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 RTL1A6NKG5 1358 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 AK2P54819 239 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 DNM1Q05193 864 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 ZKSCAN5Q9Y2L8 839 aa8.17□□□□□ -1.1
SYNPO2-206ENST00000610556 GADD45BO75293 160 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 ZSCAN31Q96LW9 406 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 ZNF853P0CG23 659 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 TPD52L1Q16890 204 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 CREBRFQ8IUR6 639 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 MAP7D2Q96T17 732 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 E9PCH4 1651 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 HIP1O00291 1037 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 PIP4K2AP48426 406 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 HMGN5P82970 282 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 MAP3K11Q16584 847 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 FILIP1Q7Z7B0 1213 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 LRRC59Q96AG4 307 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 KIF2CQ99661 725 aa8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-206ENST00000610556 PIK3R4Q99570 1358 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 ZNF445P59923 1031 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 ANAPC15P60006 121 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 TPM4P67936 248 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 GUCY1B3Q02153 619 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 GPT2Q8TD30 523 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 OFD1O75665 1012 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 NBPF7P0C2Y1 421 aaPredicted RBP8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 FAM173BQ6P4H8 233 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 UNC5CLQ8IV45 518 aa8.15□□□□□ -1.1
SYNPO2-206ENST00000610556 FAM177BA6PVY3 158 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 KINO60870 393 aaKnown RBP8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 SYT1P21579 422 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 ME1P48163 572 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 UBE2HP62256 183 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 MYD88Q99836 296 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 LRRC2Q9BYS8 371 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 PDCL3Q9H2J4 239 aa8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.11
SYNPO2-206ENST00000610556 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 PPP6R1Q9UPN7 881 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 SLC39A6Q13433 755 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 ANKRD1Q15327 319 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 HOMER1Q86YM7 354 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 STK11IPQ8N1F8 1099 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 METP08581 1390 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 TET3O43151 1660 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 PTCD1O75127 700 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 LGR6Q9HBX8 967 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 RBM8AQ9Y5S9 174 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 FLT4P35916 1363 aa8.14□□□□□ -1.11
SYNPO2-206ENST00000610556 SYNE3Q6ZMZ3 975 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 USP44Q9H0E7 712 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 SH2B1Q9NRF2 756 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 ABCA6Q8N139 1617 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 TNRQ92752 1358 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 EFCAB6Q5THR3 1501 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 F13A1P00488 732 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 CCT2P78371 535 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 RALYLQ86SE5 291 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 CCAR2Q8N163 923 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 EVI5LQ96CN4 794 aa8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 INTS4Q96HW7 963 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 NOL7Q9UMY1 257 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-206ENST00000610556 SMC2O95347 1197 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 HOXC9P31274 260 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 CBX1P83916 185 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 TRDNQ13061 729 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 MTERF4Q7Z6M4 381 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 IL17REQ8NFR9 667 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 KLHDC4Q8TBB5 520 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms