RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
CTCFL-216ENST00000608263 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 BLOC1S2Q6QNY1 142 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-216ENST00000608263 TNMDQ9H2S6 317 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 TMEM63CQ9P1W3 806 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
CTCFL-216ENST00000608263 RHPN1Q8TCX5 695 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 KRT85P78386 507 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 STX6O43752 255 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 CCDC192P0DO97 292 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
CTCFL-216ENST00000608263 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 GJB2P29033 226 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-216ENST00000608263 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 ABCC1P33527 1531 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 TOM1O60784 492 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-216ENST00000608263 CHMLP26374 656 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 EYA1Q99502 592 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
CTCFL-216ENST00000608263 PSMA5P28066 241 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-216ENST00000608263 WASHC4Q2M389 1173 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 FAM173BQ6P4H8 233 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-216ENST00000608263 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 SBNO2Q9Y2G9 1366 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
CTCFL-216ENST00000608263 CBX1P83916 185 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 DNM1Q05193 864 aaKnown RBP12.32□□□□□ -0.44
CTCFL-216ENST00000608263 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
CTCFL-216ENST00000608263 CPLX1O14810 134 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 CCAR2Q8N163 923 aaKnown RBP12.31□□□□□ -0.44
CTCFL-216ENST00000608263 TSC1Q92574 1164 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 NUP62CLQ9H1M0 184 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-216ENST00000608263 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 TRPM2O94759 1503 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 CHL1O00533 1208 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 LRRC2Q9BYS8 371 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 ABCC4O15439 1325 aa12.31□□□□□ -0.44
CTCFL-216ENST00000608263 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-216ENST00000608263 CROCC2H7BZ55 1655 aa12.3□□□□□ -0.44
CTCFL-216ENST00000608263 AK2P54819 239 aa12.3□□□□□ -0.44
CTCFL-216ENST00000608263 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
CTCFL-216ENST00000608263 CLTCL1P53675 1640 aa12.3□□□□□ -0.44
CTCFL-216ENST00000608263 EXOC5O00471 708 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 PDCP20941 246 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
CTCFL-216ENST00000608263 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 CDC42BPBQ9Y5S2 1711 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 KIF6Q6ZMV9 814 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
CTCFL-216ENST00000608263 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 TMOD3Q9NYL9 352 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 MTMR7Q9Y216 660 aa12.29□□□□□ -0.44
CTCFL-216ENST00000608263 OFD1O75665 1012 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
CTCFL-216ENST00000608263 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 ME1P48163 572 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 ZSCAN22P10073 491 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-216ENST00000608263 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
CTCFL-216ENST00000608263 C16orf45Q96MC5 204 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-216ENST00000608263 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.44
CTCFL-216ENST00000608263 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.44
CTCFL-216ENST00000608263 KINO60870 393 aaKnown RBP12.27□□□□□ -0.44
CTCFL-216ENST00000608263 RAB11FIP4Q86YS3 637 aa12.27□□□□□ -0.44
CTCFL-216ENST00000608263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.449e-7■■□□□ 11.8
CTCFL-216ENST00000608263 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-216ENST00000608263 SYT1P21579 422 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 GPTP24298 496 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 TPM4P67936 248 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 CCT2P78371 535 aaKnown RBP12.27□□□□□ -0.45
CTCFL-216ENST00000608263 KIF2CQ99661 725 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 IQGAP3Q86VI3 1631 aa12.27□□□□□ -0.45
CTCFL-216ENST00000608263 ERC1Q8IUD2 1116 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms