RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MYL6BP14649 208 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
RNF43-208ENST00000584437 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
RNF43-208ENST00000584437 HS1BP3Q53T59 392 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 SKAP1Q86WV1 359 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 GNAT3A8MTJ3 354 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 PAF1Q8N7H5 531 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 IVLP07476 585 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 NOLC1Q14978 699 aaKnown RBP eCLIP15.11■□□□□ 0.01
RNF43-208ENST00000584437 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
RNF43-208ENST00000584437 KIF20AO95235 890 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■□□□□ 8.9
RNF43-208ENST00000584437 GJB2P29033 226 aa15.11■□□□□ 0.01
RNF43-208ENST00000584437 NAIPQ13075 1403 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 EHBP1Q8NDI1 1231 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 TROQ12816 1431 aaPredicted RBP15.1■□□□□ 0.01
RNF43-208ENST00000584437 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
RNF43-208ENST00000584437 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 SPECC1LQ69YQ0 1117 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 ZKSCAN5Q9Y2L8 839 aa15.1■□□□□ 0.01
RNF43-208ENST00000584437 PTPRCP08575 1304 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 SPECC1Q5M775 1068 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 TXNDC2Q86VQ3 553 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 PYM1Q9BRP8 204 aaKnown RBP15.09■□□□□ 0.01
RNF43-208ENST00000584437 LRP2BPQ9P2M1 347 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 TRIM27P14373 513 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 PRXQ9BXM0 1461 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 GTPBP4Q9BZE4 634 aaKnown RBP15.09■□□□□ 0.01
RNF43-208ENST00000584437 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
RNF43-208ENST00000584437 RAB34Q9BZG1 259 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
RNF43-208ENST00000584437 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
RNF43-208ENST00000584437 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0.01
RNF43-208ENST00000584437 ZSCAN16Q9H4T2 348 aaPredicted RBP15.08■□□□□ 0.01
RNF43-208ENST00000584437 NCOA1Q15788 1441 aa15.08■□□□□ 0
RNF43-208ENST00000584437 GNG11P61952 73 aa15.08■□□□□ 0
RNF43-208ENST00000584437 EVI5LQ96CN4 794 aa15.08■□□□□ 0
RNF43-208ENST00000584437 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
RNF43-208ENST00000584437 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
RNF43-208ENST00000584437 SRRTQ9BXP5 876 aaKnown RBP15.08■□□□□ 0
RNF43-208ENST00000584437 HECW1Q76N89 1606 aa15.08■□□□□ 0
RNF43-208ENST00000584437 CPLX3Q8WVH0 158 aa15.08■□□□□ 0
RNF43-208ENST00000584437 ARFGAP3Q9NP61 516 aa15.08■□□□□ 0
RNF43-208ENST00000584437 GSTTP1A0A1W2PQM5 241 aa15.07■□□□□ 0
RNF43-208ENST00000584437 CCDC12Q8WUD4 166 aaPredicted RBP15.07■□□□□ 0
RNF43-208ENST00000584437 DNAAF4Q8WXU2 420 aa15.07■□□□□ 0
RNF43-208ENST00000584437 SSR1P43307 286 aaKnown RBP15.07■□□□□ 0
RNF43-208ENST00000584437 TICAM2Q86XR7 235 aa15.07■□□□□ 0
RNF43-208ENST00000584437 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
RNF43-208ENST00000584437 HLTFQ14527 1009 aaKnown RBP eCLIP15.07■□□□□ 0
RNF43-208ENST00000584437 TTC22Q5TAA0 569 aa15.07■□□□□ 0
RNF43-208ENST00000584437 BCCIPQ9P287 314 aaKnown RBP eCLIP15.07■□□□□ 0
RNF43-208ENST00000584437 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 ZNF76P36508 570 aa15.06■□□□□ 0
RNF43-208ENST00000584437 CKAP4Q07065 602 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 TDRD12Q587J7 1177 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
RNF43-208ENST00000584437 SNX21Q969T3 373 aa15.06■□□□□ 0
RNF43-208ENST00000584437 HMG20BQ9P0W2 317 aa15.06■□□□□ 0
RNF43-208ENST00000584437 TFIP11Q9UBB9 837 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 ZSCAN22P10073 491 aaPredicted RBP15.06■□□□□ 0
RNF43-208ENST00000584437 HDAC1Q13547 482 aaPredicted RBP15.06■□□□□ 0
RNF43-208ENST00000584437 GPATCH11Q8N954 259 aa15.06■□□□□ 0
RNF43-208ENST00000584437 MNAT1P51948 309 aa15.06■□□□□ 0
RNF43-208ENST00000584437 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 FAM114A1Q8IWE2 563 aa15.06■□□□□ 0
RNF43-208ENST00000584437 CTCFLQ8NI51 663 aaPredicted RBP15.06■□□□□ 0
RNF43-208ENST00000584437 GOPCQ9HD26 462 aa15.06■□□□□ 0
RNF43-208ENST00000584437 GUCY1B3Q02153 619 aa15.06■□□□□ 0
RNF43-208ENST00000584437 NAPBQ9H115 298 aa15.06■□□□□ 0
RNF43-208ENST00000584437 SEC63Q9UGP8 760 aaKnown RBP15.06■□□□□ 0
RNF43-208ENST00000584437 SLC12A7Q9Y666 1083 aa15.05■□□□□ 0
RNF43-208ENST00000584437 CCDC141Q6ZP82 1450 aa15.05■□□□□ 0
RNF43-208ENST00000584437 TUBB4BP68371 445 aa15.05■□□□□ -0
RNF43-208ENST00000584437 CCDC102BQ68D86 513 aa15.05■□□□□ -0
RNF43-208ENST00000584437 ECHDC1Q9NTX5 307 aa15.05■□□□□ -0
RNF43-208ENST00000584437 GOLGA8BA8MQT2 603 aa15.05■□□□□ -0
RNF43-208ENST00000584437 ZNF213O14771 459 aa15.05■□□□□ -0
RNF43-208ENST00000584437 STAMBPO95630 424 aa15.05■□□□□ -0
RNF43-208ENST00000584437 CEP112Q8N8E3 955 aa15.05■□□□□ -0
RNF43-208ENST00000584437 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
RNF43-208ENST00000584437 RNF41Q9H4P4 317 aaPredicted RBP15.05■□□□□ -0
RNF43-208ENST00000584437 GRIN2BQ13224 1484 aa15.05■□□□□ -0
RNF43-208ENST00000584437 IBSPP21815 317 aaPredicted RBP15.04■□□□□ -0
RNF43-208ENST00000584437 IGHMBP2P38935 993 aaKnown RBP15.04■□□□□ -0
RNF43-208ENST00000584437 TMEM266Q2M3C6 531 aa15.04■□□□□ -0
RNF43-208ENST00000584437 THUMPD2Q9BTF0 503 aaKnown RBP15.04■□□□□ -0
RNF43-208ENST00000584437 SKILP12757 684 aa15.04■□□□□ -0
RNF43-208ENST00000584437 MTIF2P46199 727 aaKnown RBP15.04■□□□□ -0
RNF43-208ENST00000584437 METTL24Q5JXM2 366 aa15.04■□□□□ -0
RNF43-208ENST00000584437 IL16Q14005 1332 aa15.04■□□□□ -0
RNF43-208ENST00000584437 HSF2BPO75031 334 aa15.04■□□□□ -0
RNF43-208ENST00000584437 IGHDP01880 384 aa15.04■□□□□ -0
RNF43-208ENST00000584437 TMX3Q96JJ7 454 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms