RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 USP42Q9H9J4 1324 aaKnown RBP15.86■□□□□ 0.13
USB1-207ENST00000563149 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
USB1-207ENST00000563149 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
USB1-207ENST00000563149 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
USB1-207ENST00000563149 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 PI4K2BQ8TCG2 481 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
USB1-207ENST00000563149 TMEM63CQ9P1W3 806 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 WDR33Q9C0J8 1336 aaKnown RBP15.85■□□□□ 0.13
USB1-207ENST00000563149 SGSM2O43147 1006 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 TPM2P07951 284 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 HDAC5Q9UQL6 1122 aa15.85■□□□□ 0.13
USB1-207ENST00000563149 LTN1O94822 1766 aa15.84■□□□□ 0.13
USB1-207ENST00000563149 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
USB1-207ENST00000563149 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
USB1-207ENST00000563149 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
USB1-207ENST00000563149 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
USB1-207ENST00000563149 RAD50Q92878 1312 aa15.84■□□□□ 0.13
USB1-207ENST00000563149 TERF1P54274 439 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
USB1-207ENST00000563149 PHRF1Q9P1Y6 1649 aaKnown RBP15.83■□□□□ 0.12
USB1-207ENST00000563149 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 CRYBG1Q9Y4K1 1723 aa15.83■□□□□ 0.12
USB1-207ENST00000563149 PHF14O94880 888 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 KCNA6P17658 529 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 MCM5P33992 734 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 MTX1Q13505 466 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 NUTM1Q86Y26 1132 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 LTV1Q96GA3 475 aaPredicted RBP15.82■□□□□ 0.12
USB1-207ENST00000563149 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 OFD1O75665 1012 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.82■□□□□ 0.12
USB1-207ENST00000563149 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
USB1-207ENST00000563149 NFAT5O94916 1531 aa15.81■□□□□ 0.12
USB1-207ENST00000563149 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
USB1-207ENST00000563149 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
USB1-207ENST00000563149 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
USB1-207ENST00000563149 TMEM87AQ8NBN3 555 aa15.81■□□□□ 0.12
USB1-207ENST00000563149 NCAPD2Q15021 1401 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 SYCE3A1L190 88 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 GLRX3O76003 335 aaKnown RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 KIAA1211Q6ZU35 1233 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 LSG1Q9H089 658 aaKnown RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 ALDH1L1O75891 902 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 PLEKHO1Q53GL0 409 aaPredicted RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 TTC14Q96N46 770 aa15.8■□□□□ 0.12
USB1-207ENST00000563149 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 NSFL1CQ9UNZ2 370 aaKnown RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.8■□□□□ 0.12
USB1-207ENST00000563149 PI4KAP2A4QPH2 592 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
USB1-207ENST00000563149 NBPF7P0C2Y1 421 aaPredicted RBP15.79■□□□□ 0.12
USB1-207ENST00000563149 TEFQ10587 303 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 PI4KAP1Q8N8J0 262 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 CHPF2Q9P2E5 772 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
USB1-207ENST00000563149 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
USB1-207ENST00000563149 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
USB1-207ENST00000563149 FOXD4L5Q5VV16 416 aaPredicted RBP15.78■□□□□ 0.12
USB1-207ENST00000563149 NBPF6Q5VWK0 638 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 FOXD4L4Q8WXT5 416 aaPredicted RBP15.78■□□□□ 0.12
USB1-207ENST00000563149 NBPF4Q96M43 638 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 IL25Q9H293 177 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
USB1-207ENST00000563149 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 UVSSAQ2YD98 709 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 CLASRPQ8N2M8 674 aaKnown RBP15.77■□□□□ 0.12
USB1-207ENST00000563149 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 GPATCH3Q96I76 525 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
USB1-207ENST00000563149 CHD2O14647 1828 aaKnown RBP15.77■□□□□ 0.11
USB1-207ENST00000563149 NOL8Q76FK4 1167 aaKnown RBP15.77■□□□□ 0.11
USB1-207ENST00000563149 C14orf37Q86TY3 774 aa15.77■□□□□ 0.11
USB1-207ENST00000563149 TM6SF1Q9BZW5 370 aa15.77■□□□□ 0.11
USB1-207ENST00000563149 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.11
USB1-207ENST00000563149 ATP6V1DQ9Y5K8 247 aa15.77■□□□□ 0.11
USB1-207ENST00000563149 ADCY9O60503 1353 aa15.77■□□□□ 0.11
USB1-207ENST00000563149 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
USB1-207ENST00000563149 USP48Q86UV5 1035 aa15.76■□□□□ 0.11
USB1-207ENST00000563149 KCNB2Q92953 911 aa15.76■□□□□ 0.11
USB1-207ENST00000563149 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
USB1-207ENST00000563149 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
USB1-207ENST00000563149 LMTK3Q96Q04 1460 aa15.76■□□□□ 0.11
USB1-207ENST00000563149 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms