RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ADRA2BP18089 450 aa21.26■□□□□ 0.99
PCNX4-213ENST00000556907 SSFA2P28290 1259 aa21.26■□□□□ 0.99
PCNX4-213ENST00000556907 CRKLP46109 303 aaKnown RBP21.26■□□□□ 0.99
PCNX4-213ENST00000556907 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
PCNX4-213ENST00000556907 SOS1Q07889 1333 aaPredicted RBP21.26■□□□□ 0.99
PCNX4-213ENST00000556907 RPS6KA4O75676 772 aa21.25■□□□□ 0.99
PCNX4-213ENST00000556907 CCDC87Q9NVE4 849 aa21.25■□□□□ 0.99
PCNX4-213ENST00000556907 RTCBQ9Y3I0 505 aaKnown RBP21.25■□□□□ 0.99
PCNX4-213ENST00000556907 E9PSI1 815 aa21.24■□□□□ 0.99
PCNX4-213ENST00000556907 GNPATO15228 680 aa21.24■□□□□ 0.99
PCNX4-213ENST00000556907 SLFN5Q08AF3 891 aa21.24■□□□□ 0.99
PCNX4-213ENST00000556907 MYH16Q9H6N6 1097 aa21.24■□□□□ 0.99
PCNX4-213ENST00000556907 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
PCNX4-213ENST00000556907 TRMT2AQ8IZ69 625 aaKnown RBP21.23■□□□□ 0.99
PCNX4-213ENST00000556907 SLC16A10Q8TF71 515 aa21.23■□□□□ 0.99
PCNX4-213ENST00000556907 CDCA7LQ96GN5 454 aa21.23■□□□□ 0.99
PCNX4-213ENST00000556907 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
PCNX4-213ENST00000556907 CACNA1FO60840 1977 aa21.23■□□□□ 0.99
PCNX4-213ENST00000556907 MYH14Q7Z406 1995 aaKnown RBP21.22■□□□□ 0.99
PCNX4-213ENST00000556907 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
PCNX4-213ENST00000556907 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
PCNX4-213ENST00000556907 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
PCNX4-213ENST00000556907 DUSP27Q5VZP5 1158 aa21.21■□□□□ 0.99
PCNX4-213ENST00000556907 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
PCNX4-213ENST00000556907 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.99
PCNX4-213ENST00000556907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.2■□□□□ 0.98
PCNX4-213ENST00000556907 PSDA5PKW4 1024 aaPredicted RBP21.2■□□□□ 0.98
PCNX4-213ENST00000556907 IL6STP40189 918 aaPredicted RBP21.2■□□□□ 0.98
PCNX4-213ENST00000556907 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
PCNX4-213ENST00000556907 SPINK5Q9NQ38 1064 aaPredicted RBP21.19■□□□□ 0.98
PCNX4-213ENST00000556907 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
PCNX4-213ENST00000556907 A0A087WZG4 1122 aa21.18■□□□□ 0.98
PCNX4-213ENST00000556907 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
PCNX4-213ENST00000556907 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
PCNX4-213ENST00000556907 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
PCNX4-213ENST00000556907 A1BGP04217 495 aa21.17■□□□□ 0.98
PCNX4-213ENST00000556907 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
PCNX4-213ENST00000556907 COL23A1Q86Y22 540 aaPredicted RBP21.17■□□□□ 0.98
PCNX4-213ENST00000556907 TSR2Q969E8 191 aaKnown RBP21.17■□□□□ 0.98
PCNX4-213ENST00000556907 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
PCNX4-213ENST00000556907 RFC4P35249 363 aa21.16■□□□□ 0.98
PCNX4-213ENST00000556907 CASZ1Q86V15 1759 aa21.15■□□□□ 0.98
PCNX4-213ENST00000556907 PHF14O94880 888 aa21.15■□□□□ 0.98
PCNX4-213ENST00000556907 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
PCNX4-213ENST00000556907 MSH5O43196 834 aa21.14■□□□□ 0.97
PCNX4-213ENST00000556907 EIF2S2P20042 333 aaKnown RBP21.14■□□□□ 0.97
PCNX4-213ENST00000556907 HDGFL1Q5TGJ6 251 aa21.14■□□□□ 0.97
PCNX4-213ENST00000556907 C8orf58Q8NAV2 365 aa21.14■□□□□ 0.97
PCNX4-213ENST00000556907 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
PCNX4-213ENST00000556907 COL15A1P39059 1388 aa21.13■□□□□ 0.97
PCNX4-213ENST00000556907 KRT24Q2M2I5 525 aa21.13■□□□□ 0.97
PCNX4-213ENST00000556907 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
PCNX4-213ENST00000556907 RGL2O15211 777 aa21.12■□□□□ 0.97
PCNX4-213ENST00000556907 ZPR1O75312 459 aa21.12■□□□□ 0.97
PCNX4-213ENST00000556907 TWISTNBQ3B726 338 aaPredicted RBP21.12■□□□□ 0.97
PCNX4-213ENST00000556907 CCDC30Q5VVM6 783 aa21.12■□□□□ 0.97
PCNX4-213ENST00000556907 DDX21Q9NR30 783 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCNX4-213ENST00000556907 DBF4Q9UBU7 674 aaPredicted RBP21.12■□□□□ 0.97
PCNX4-213ENST00000556907 NARFQ9UHQ1 456 aa21.12■□□□□ 0.97
PCNX4-213ENST00000556907 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
PCNX4-213ENST00000556907 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
PCNX4-213ENST00000556907 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
PCNX4-213ENST00000556907 ELL2O00472 640 aaPredicted RBP21.1■□□□□ 0.97
PCNX4-213ENST00000556907 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
PCNX4-213ENST00000556907 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
PCNX4-213ENST00000556907 PDGFDQ9GZP0 370 aaPredicted RBP21.1■□□□□ 0.97
PCNX4-213ENST00000556907 SPON1Q9HCB6 807 aa21.1■□□□□ 0.97
PCNX4-213ENST00000556907 USP42Q9H9J4 1324 aaKnown RBP21.09■□□□□ 0.97
PCNX4-213ENST00000556907 TSPYL6Q8N831 410 aa21.09■□□□□ 0.97
PCNX4-213ENST00000556907 HYPKQ9NX55 129 aa21.09■□□□□ 0.97
PCNX4-213ENST00000556907 VAMP4O75379 141 aa21.08■□□□□ 0.97
PCNX4-213ENST00000556907 CT47B1P0C2W7 299 aaPredicted RBP21.08■□□□□ 0.97
PCNX4-213ENST00000556907 PDIA6Q15084 440 aa21.08■□□□□ 0.97
PCNX4-213ENST00000556907 ZNF428Q96B54 188 aa21.08■□□□□ 0.97
PCNX4-213ENST00000556907 ZNF330Q9Y3S2 320 aaPredicted RBP21.08■□□□□ 0.97
PCNX4-213ENST00000556907 C4AP0C0L4 1744 aa21.07■□□□□ 0.96
PCNX4-213ENST00000556907 ZBTB7AO95365 584 aa21.07■□□□□ 0.96
PCNX4-213ENST00000556907 DZIP3Q86Y13 1208 aaKnown RBP21.07■□□□□ 0.96
PCNX4-213ENST00000556907 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
PCNX4-213ENST00000556907 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
PCNX4-213ENST00000556907 GYS1P13807 737 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 MYL6BP14649 208 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 POLD1P28340 1107 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 COL24A1Q17RW2 1714 aa21.06■□□□□ 0.96
PCNX4-213ENST00000556907 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
PCNX4-213ENST00000556907 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
PCNX4-213ENST00000556907 USPL1Q5W0Q7 1092 aa21.05■□□□□ 0.96
PCNX4-213ENST00000556907 LRP10Q7Z4F1 713 aa21.05■□□□□ 0.96
PCNX4-213ENST00000556907 NECTIN2Q92692 538 aa21.05■□□□□ 0.96
PCNX4-213ENST00000556907 ZNF652Q9Y2D9 606 aa21.05■□□□□ 0.96
PCNX4-213ENST00000556907 KIF6Q6ZMV9 814 aa21.04■□□□□ 0.96
PCNX4-213ENST00000556907 ARXQ96QS3 562 aa21.04■□□□□ 0.96
PCNX4-213ENST00000556907 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
PCNX4-213ENST00000556907 TBC1D2BQ9UPU7 963 aa21.04■□□□□ 0.96
PCNX4-213ENST00000556907 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
PCNX4-213ENST00000556907 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
PCNX4-213ENST00000556907 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms