RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
FOXN3-212ENST00000556541 UBR3Q6ZT12 1888 aa14.49□□□□□ -0.09
FOXN3-212ENST00000556541 CYP19A1P11511 503 aaPredicted RBP14.49□□□□□ -0.09
FOXN3-212ENST00000556541 ATP6V1AP38606 617 aa14.49□□□□□ -0.09
FOXN3-212ENST00000556541 KRT24Q2M2I5 525 aa14.49□□□□□ -0.09
FOXN3-212ENST00000556541 CAMKK2Q96RR4 588 aa14.49□□□□□ -0.09
FOXN3-212ENST00000556541 CCNL1Q9UK58 526 aaPredicted RBP14.49□□□□□ -0.09
FOXN3-212ENST00000556541 ITPK1Q13572 414 aa14.48□□□□□ -0.09
FOXN3-212ENST00000556541 TXNRD1Q16881 649 aa14.48□□□□□ -0.09
FOXN3-212ENST00000556541 HDGFL1Q5TGJ6 251 aa14.48□□□□□ -0.09
FOXN3-212ENST00000556541 DNAJC10Q8IXB1 793 aa14.48□□□□□ -0.09
FOXN3-212ENST00000556541 DDX21Q9NR30 783 aaKnown RBP eCLIP14.48□□□□□ -0.09
FOXN3-212ENST00000556541 DBF4Q9UBU7 674 aaPredicted RBP14.48□□□□□ -0.09
FOXN3-212ENST00000556541 USP16Q9Y5T5 823 aa14.48□□□□□ -0.09
FOXN3-212ENST00000556541 RGL2O15211 777 aa14.47□□□□□ -0.09
FOXN3-212ENST00000556541 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
FOXN3-212ENST00000556541 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
FOXN3-212ENST00000556541 PROM2Q8N271 834 aa14.47□□□□□ -0.09
FOXN3-212ENST00000556541 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
FOXN3-212ENST00000556541 PDIA6Q15084 440 aa14.46□□□□□ -0.09
FOXN3-212ENST00000556541 LRP10Q7Z4F1 713 aa14.46□□□□□ -0.09
FOXN3-212ENST00000556541 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
FOXN3-212ENST00000556541 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
FOXN3-212ENST00000556541 HYPKQ9NX55 129 aa14.46□□□□□ -0.09
FOXN3-212ENST00000556541 KIF16BQ96L93 1317 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 IL6STP40189 918 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-212ENST00000556541 LINC00116Q8NCU8 138 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 CCDC87Q9NVE4 849 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 TUBGCP6Q96RT7 1819 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 BCORQ6W2J9 1755 aa14.45□□□□□ -0.1
FOXN3-212ENST00000556541 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
FOXN3-212ENST00000556541 ADRA2BP18089 450 aa14.44□□□□□ -0.1
FOXN3-212ENST00000556541 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
FOXN3-212ENST00000556541 INTS5Q6P9B9 1019 aaKnown RBP14.44□□□□□ -0.1
FOXN3-212ENST00000556541 SSH1Q8WYL5 1049 aa14.44□□□□□ -0.1
FOXN3-212ENST00000556541 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
FOXN3-212ENST00000556541 IBTKQ9P2D0 1353 aaPredicted RBP14.44□□□□□ -0.1
FOXN3-212ENST00000556541 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
FOXN3-212ENST00000556541 PTPRCP08575 1304 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 SCN7AQ01118 1682 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 NBPF26B4DH59 902 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 EIF5P55010 431 aaKnown RBP14.43□□□□□ -0.1
FOXN3-212ENST00000556541 NBPF14Q5TI25 921 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 NBPF10Q6P3W6 841 aaKnown RBP14.43□□□□□ -0.1
FOXN3-212ENST00000556541 MRPL50Q8N5N7 158 aaKnown RBP14.43□□□□□ -0.1
FOXN3-212ENST00000556541 NBPF15Q8N660 670 aa14.43□□□□□ -0.1
FOXN3-212ENST00000556541 RNF123Q5XPI4 1314 aa14.42□□□□□ -0.1
FOXN3-212ENST00000556541 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
FOXN3-212ENST00000556541 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
FOXN3-212ENST00000556541 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
FOXN3-212ENST00000556541 CHPF2Q9P2E5 772 aa14.42□□□□□ -0.1
FOXN3-212ENST00000556541 PXDNLA1KZ92 1463 aa14.42□□□□□ -0.1
FOXN3-212ENST00000556541 A0A087WZG4 1122 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 A1BGP04217 495 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 SSFA2P28290 1259 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
FOXN3-212ENST00000556541 SMC4Q9NTJ3 1288 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 ZBTB1Q9Y2K1 713 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 ANKRD36CQ5JPF3 1778 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
FOXN3-212ENST00000556541 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
FOXN3-212ENST00000556541 FLAD1Q8NFF5 587 aa14.4□□□□□ -0.1
FOXN3-212ENST00000556541 NUP98P52948 1817 aa14.39□□□□□ -0.11
FOXN3-212ENST00000556541 COL15A1P39059 1388 aa14.39□□□□□ -0.11
FOXN3-212ENST00000556541 FLIIQ13045 1269 aa14.39□□□□□ -0.11
FOXN3-212ENST00000556541 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
FOXN3-212ENST00000556541 AK7Q96M32 723 aa14.39□□□□□ -0.11
FOXN3-212ENST00000556541 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
FOXN3-212ENST00000556541 ERVV-1B6SEH8 477 aa14.38□□□□□ -0.11
FOXN3-212ENST00000556541 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
FOXN3-212ENST00000556541 MS4A1P11836 297 aa14.38□□□□□ -0.11
FOXN3-212ENST00000556541 PROSER3Q2NL68 480 aa14.38□□□□□ -0.11
FOXN3-212ENST00000556541 DEFB132Q7Z7B7 95 aa14.38□□□□□ -0.11
FOXN3-212ENST00000556541 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
FOXN3-212ENST00000556541 BCAR3O75815 825 aa14.37□□□□□ -0.11
FOXN3-212ENST00000556541 PLBD2Q8NHP8 589 aa14.37□□□□□ -0.11
FOXN3-212ENST00000556541 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
FOXN3-212ENST00000556541 ATP10DQ9P241 1426 aa14.37□□□□□ -0.11
FOXN3-212ENST00000556541 GNPATO15228 680 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 KCNQ4P56696 695 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 CLEC4GQ6UXB4 293 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 ATF7IPQ6VMQ6 1270 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
FOXN3-212ENST00000556541 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 MAP3K15Q6ZN16 1313 aa14.36□□□□□ -0.11
FOXN3-212ENST00000556541 MYL6BP14649 208 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
FOXN3-212ENST00000556541 PDE3AQ14432 1141 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 G2E3Q7L622 706 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
FOXN3-212ENST00000556541 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms