RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 VCANP13611 3396 aa16.85■□□□□ 0.29
ABCD4-222ENST00000555617 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
ABCD4-222ENST00000555617 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-222ENST00000555617 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
ABCD4-222ENST00000555617 CACNA1SQ13698 1873 aa16.83■□□□□ 0.28
ABCD4-222ENST00000555617 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
ABCD4-222ENST00000555617 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
ABCD4-222ENST00000555617 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
ABCD4-222ENST00000555617 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
ABCD4-222ENST00000555617 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
ABCD4-222ENST00000555617 KDRP35968 1356 aa16.81■□□□□ 0.28
ABCD4-222ENST00000555617 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
ABCD4-222ENST00000555617 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
ABCD4-222ENST00000555617 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
ABCD4-222ENST00000555617 ANKRD31Q8N7Z5 1873 aa16.81■□□□□ 0.28
ABCD4-222ENST00000555617 SPTBN5Q9NRC6 3674 aaKnown RBP16.81■□□□□ 0.28
ABCD4-222ENST00000555617 USP31Q70CQ4 1352 aa16.8■□□□□ 0.28
ABCD4-222ENST00000555617 HTTP42858 3142 aa16.8■□□□□ 0.28
ABCD4-222ENST00000555617 CYP27B1O15528 508 aa16.8■□□□□ 0.28
ABCD4-222ENST00000555617 RFC4P35249 363 aa16.8■□□□□ 0.28
ABCD4-222ENST00000555617 SAPCD2Q86UD0 394 aa16.8■□□□□ 0.28
ABCD4-222ENST00000555617 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
ABCD4-222ENST00000555617 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
ABCD4-222ENST00000555617 C21orf2O43822 256 aa16.79■□□□□ 0.28
ABCD4-222ENST00000555617 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
ABCD4-222ENST00000555617 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
ABCD4-222ENST00000555617 ADRA2BP18089 450 aa16.77■□□□□ 0.28
ABCD4-222ENST00000555617 NME9Q86XW9 330 aa16.77■□□□□ 0.28
ABCD4-222ENST00000555617 IP6K1Q92551 441 aa16.77■□□□□ 0.28
ABCD4-222ENST00000555617 OTUD5Q96G74 571 aa16.77■□□□□ 0.28
ABCD4-222ENST00000555617 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.28
ABCD4-222ENST00000555617 SLX4Q8IY92 1834 aa16.77■□□□□ 0.27
ABCD4-222ENST00000555617 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
ABCD4-222ENST00000555617 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
ABCD4-222ENST00000555617 TM4SF1P30408 202 aa16.76■□□□□ 0.27
ABCD4-222ENST00000555617 CENPFP49454 3210 aa16.76■□□□□ 0.27
ABCD4-222ENST00000555617 INSRP06213 1382 aa16.76■□□□□ 0.27
ABCD4-222ENST00000555617 KIAA0100Q14667 2235 aaKnown RBP16.76■□□□□ 0.27
ABCD4-222ENST00000555617 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 C2CD5Q86YS7 1000 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
ABCD4-222ENST00000555617 USP42Q9H9J4 1324 aaKnown RBP16.74■□□□□ 0.27
ABCD4-222ENST00000555617 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-222ENST00000555617 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
ABCD4-222ENST00000555617 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
ABCD4-222ENST00000555617 RAPGEFL1Q9UHV5 662 aa16.74■□□□□ 0.27
ABCD4-222ENST00000555617 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
ABCD4-222ENST00000555617 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
ABCD4-222ENST00000555617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
ABCD4-222ENST00000555617 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
ABCD4-222ENST00000555617 NBPF6Q5VWK0 638 aa16.72■□□□□ 0.27
ABCD4-222ENST00000555617 NBPF4Q96M43 638 aa16.72■□□□□ 0.27
ABCD4-222ENST00000555617 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
ABCD4-222ENST00000555617 CNTNAP4Q9C0A0 1308 aa16.71■□□□□ 0.27
ABCD4-222ENST00000555617 TRPA1O75762 1119 aa16.71■□□□□ 0.27
ABCD4-222ENST00000555617 RNF186Q9NXI6 227 aa16.71■□□□□ 0.27
ABCD4-222ENST00000555617 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
ABCD4-222ENST00000555617 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
ABCD4-222ENST00000555617 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
ABCD4-222ENST00000555617 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
ABCD4-222ENST00000555617 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
ABCD4-222ENST00000555617 SAGE1Q9NXZ1 904 aa16.69■□□□□ 0.26
ABCD4-222ENST00000555617 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
ABCD4-222ENST00000555617 FBLN1P23142 703 aa16.68■□□□□ 0.26
ABCD4-222ENST00000555617 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
ABCD4-222ENST00000555617 PRDM6Q9NQX0 595 aa16.68■□□□□ 0.26
ABCD4-222ENST00000555617 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
ABCD4-222ENST00000555617 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
ABCD4-222ENST00000555617 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-222ENST00000555617 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
ABCD4-222ENST00000555617 FAM155AB1AL88 458 aaPredicted RBP16.66■□□□□ 0.26
ABCD4-222ENST00000555617 HOXC9P31274 260 aa16.66■□□□□ 0.26
ABCD4-222ENST00000555617 NOGQ13253 232 aa16.66■□□□□ 0.26
ABCD4-222ENST00000555617 NFIXQ14938 502 aa16.66■□□□□ 0.26
ABCD4-222ENST00000555617 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
ABCD4-222ENST00000555617 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
ABCD4-222ENST00000555617 H0YGN5 161 aa16.65■□□□□ 0.26
ABCD4-222ENST00000555617 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
ABCD4-222ENST00000555617 H0YIN7 160 aa16.64■□□□□ 0.25
ABCD4-222ENST00000555617 COL9A1P20849 921 aa16.64■□□□□ 0.25
ABCD4-222ENST00000555617 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
ABCD4-222ENST00000555617 COL4A5P29400 1685 aa16.64■□□□□ 0.25
ABCD4-222ENST00000555617 MAP3K19Q56UN5 1328 aa16.64■□□□□ 0.25
ABCD4-222ENST00000555617 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-222ENST00000555617 TJP1Q07157 1748 aa16.63■□□□□ 0.25
ABCD4-222ENST00000555617 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
ABCD4-222ENST00000555617 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
ABCD4-222ENST00000555617 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
ABCD4-222ENST00000555617 SOX1O00570 391 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-222ENST00000555617 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-222ENST00000555617 EPS15P42566 896 aa16.62■□□□□ 0.25
ABCD4-222ENST00000555617 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-222ENST00000555617 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
ABCD4-222ENST00000555617 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-222ENST00000555617 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
ABCD4-222ENST00000555617 SERPINB2P05120 415 aa16.6■□□□□ 0.25
ABCD4-222ENST00000555617 PKN2Q16513 984 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms