RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 TNNQ9UQP3 1299 aa11.15□□□□□ -0.63
AC055716.2-201ENST00000552545 RGS12O14924 1447 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 TRIM37O94972 964 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 MYL6BP14649 208 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 CHMP4AQ9BY43 222 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 RNF123Q5XPI4 1314 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 BTAF1O14981 1849 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 G2E3Q7L622 706 aa11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
AC055716.2-201ENST00000552545 CACNA1FO60840 1977 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 NHSQ6T4R5 1651 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 DBF4Q9UBU7 674 aaPredicted RBP11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
AC055716.2-201ENST00000552545 A1BGP04217 495 aa11.12□□□□□ -0.63
AC055716.2-201ENST00000552545 KCNQ4P56696 695 aa11.12□□□□□ -0.63
AC055716.2-201ENST00000552545 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
AC055716.2-201ENST00000552545 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
AC055716.2-201ENST00000552545 ATF7IPQ6VMQ6 1270 aa11.12□□□□□ -0.63
AC055716.2-201ENST00000552545 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 TRIM27P14373 513 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 SIK1P57059 783 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 FKBP5Q13451 457 aaPredicted RBP11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 EP400Q96L91 3159 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 BCL11BQ9C0K0 894 aaPredicted RBP11.11□□□□□ -0.63
AC055716.2-201ENST00000552545 STARD3NLO95772 234 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 FLIIQ13045 1269 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 EXOC6Q8TAG9 804 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
AC055716.2-201ENST00000552545 F6X3S4 739 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 MS4A1P11836 297 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 RLBP1P12271 317 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 API5Q9BZZ5 524 aaKnown RBP11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 HYPKQ9NX55 129 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 PTPRCP08575 1304 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 PDE3AQ14432 1141 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 PDIA6Q15084 440 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
AC055716.2-201ENST00000552545 CCNL1Q9UK58 526 aaPredicted RBP11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 TJP1Q07157 1748 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 APBA3O96018 575 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 ITPK1Q13572 414 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 NBPF10Q6P3W6 841 aaKnown RBP11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 NBPF15Q8N660 670 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
AC055716.2-201ENST00000552545 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
AC055716.2-201ENST00000552545 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
AC055716.2-201ENST00000552545 PI4KAP2A4QPH2 592 aa11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 DDX58O95786 925 aaKnown RBP11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 PI4KAP1Q8N8J0 262 aa11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
AC055716.2-201ENST00000552545 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 MAP3K2Q9Y2U5 619 aa11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 LY75O60449 1722 aa11.05□□□□□ -0.64
AC055716.2-201ENST00000552545 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 ABCC4O15439 1325 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 INTS5Q6P9B9 1019 aaKnown RBP11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
AC055716.2-201ENST00000552545 SF3B2Q13435 895 aaKnown RBP11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 COL5A3P25940 1745 aaPredicted RBP11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 ADCY9O60503 1353 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 TAF1LQ8IZX4 1826 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms