RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FAM9AQ8IZU1 332 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 OGFOD1Q8N543 542 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 CDCA7Q9BWT1 371 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 GZF1Q9H116 711 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 CHIC2Q9UKJ5 165 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 CDK11AQ9UQ88 783 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 SPAG9O60271 1321 aaKnown RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 CEP162Q5TB80 1403 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 SHANK2Q9UPX8 1470 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 ATP7AQ04656 1500 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 LRRC7Q96NW7 1537 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 KDM5DQ9BY66 1539 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 SPATA31D1Q6ZQQ2 1576 aa3.85□□□□□ -1.79
CPSF6-207ENST00000551516 CEP170BQ9Y4F5 1589 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-207ENST00000551516 MROH2AA6NES4 1674 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 ZNF142P52746 1687 aaPredicted RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 CD2BP2O95400 341 aaKnown RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 RPIAP49247 311 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 WNT7BP56706 349 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 TRIM32Q13049 653 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 PTK7Q13308 1070 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 CRTC2Q53ET0 693 aaPredicted RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 C4orf48Q5BLP8 95 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 TMEM164Q5U3C3 297 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 TRMT44Q8IYL2 757 aaKnown RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 LARGE2Q8N3Y3 721 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 CCDC85AQ96PX6 553 aaPredicted RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 C1QTNF2Q9BXJ5 285 aa3.84□□□□□ -1.79
CPSF6-207ENST00000551516 ESF1Q9H501 851 aaKnown RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 DNAAF2Q9NVR5 837 aaKnown RBP3.84□□□□□ -1.79
CPSF6-207ENST00000551516 FYCO1Q9BQS8 1478 aa3.84□□□□□ -1.8
CPSF6-207ENST00000551516 MROH1Q8NDA8 1641 aa3.84□□□□□ -1.8
CPSF6-207ENST00000551516 ITSN2Q9NZM3 1697 aa3.84□□□□□ -1.8
CPSF6-207ENST00000551516 UBAP1LF5GYI3 381 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 MYCP01106 439 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-207ENST00000551516 TSGA10IPQ3SY00 556 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 TMCO4Q5TGY1 634 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 PPP1R18Q6NYC8 613 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 POTEAQ6S8J7 498 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 VASH1Q7L8A9 365 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-207ENST00000551516 EHBP1Q8NDI1 1231 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 STK32AQ8WU08 396 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 KCTD15Q96SI1 283 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-207ENST00000551516 CFDP1Q9UEE9 299 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-207ENST00000551516 ZMIZ1Q9ULJ6 1067 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 PCDHB11Q9Y5F2 797 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.83□□□□□ -1.85e-6■□□□□ 8.7
CPSF6-207ENST00000551516 ARHGAP31Q2M1Z3 1444 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 CAMSAP2Q08AD1 1489 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 CCDC18Q5T9S5 1454 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 MED1Q15648 1581 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-207ENST00000551516 CDC42BPAQ5VT25 1732 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 MYO5CQ9NQX4 1742 aa3.83□□□□□ -1.8
CPSF6-207ENST00000551516 STRCP1A6NGW2 1772 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 TET3O43151 1660 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 DEPDC5O75140 1603 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 MYO3AQ8NEV4 1616 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 TIAM1Q13009 1591 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 CPS1P31327 1500 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 FAM135AQ9P2D6 1515 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 PLEKHH2Q8IVE3 1493 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 NLRP1Q9C000 1473 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 CLIP1P30622 1438 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 FAM135BQ49AJ0 1406 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 TNRQ92752 1358 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 ESPNB1AK53 854 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 RAB15P59190 212 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 GTF2IP78347 998 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 CLDN10P78369 228 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 PSME1Q06323 249 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 DPYDQ12882 1025 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 ARID5BQ14865 1188 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 SPNS2Q8IVW8 549 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 CCER1Q8TC90 406 aaPredicted RBP3.82□□□□□ -1.8
CPSF6-207ENST00000551516 ZNF594Q96JF6 807 aaPredicted RBP3.82□□□□□ -1.8
CPSF6-207ENST00000551516 MAP4K5Q9Y4K4 846 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 IVNS1ABPQ9Y6Y0 642 aa3.82□□□□□ -1.8
CPSF6-207ENST00000551516 SLIT1O75093 1534 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 NPHP4O75161 1426 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 ZBTB7BO15156 539 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 ARID4AP29374 1257 aaPredicted RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 SEC13P55735 322 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 SKOR1P84550 965 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 DHX9Q08211 1270 aaKnown RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 SWI5Q1ZZU3 235 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 PLA2G2CQ5R387 149 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 RC3H1Q5TC82 1133 aaKnown RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 CCDC102BQ68D86 513 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 GGT6Q6P531 493 aa3.81□□□□□ -1.8
CPSF6-207ENST00000551516 CLP1Q92989 425 aaKnown RBP3.81□□□□□ -1.8
CPSF6-207ENST00000551516 ABCC3O15438 1527 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 MAP3K1Q13233 1512 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 ERVK-7P63135 1459 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 NOS1P29475 1434 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 CCNB3Q8WWL7 1395 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 ERVH48-1M5A8F1 160 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 KIF3BO15066 747 aa3.8□□□□□ -1.8
CPSF6-207ENST00000551516 SSFA2P28290 1259 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms