RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FOXO3O43524 673 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 GPS2Q13227 327 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 CPA1P15085 419 aa12.07□□□□□ -0.48
SMARCC2-209ENST00000550164 PI4KAP2A4QPH2 592 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 PI4KAP1Q8N8J0 262 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 F13A1P00488 732 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 TPM1P09493 284 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 GUCY1B3Q02153 619 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 ARHGEF5Q12774 1597 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 SERPINC1P01008 464 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 AK2P54819 239 aa12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 INTS4Q96HW7 963 aaKnown RBP12.06□□□□□ -0.48
SMARCC2-209ENST00000550164 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 SYNMO15061 1565 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 IGSF3O75054 1194 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 KRT32Q14532 448 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 TSC1Q92574 1164 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 SYT1P21579 422 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 TTLL5Q6EMB2 1281 aa12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
SMARCC2-209ENST00000550164 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 GPT2Q8TD30 523 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 DDX19AQ9NUU7 478 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 ATP10AO60312 1499 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 PPIP5K1Q6PFW1 1433 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 ACEP12821 1306 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 IL13P35225 146 aa12.04□□□□□ -0.48
SMARCC2-209ENST00000550164 ANO6Q4KMQ2 910 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 FAM200AQ8TCP9 573 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 TSR1Q2NL82 804 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 ESCO1Q5FWF5 840 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 KIF18AQ8NI77 898 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 ABCC4O15439 1325 aa12.03□□□□□ -0.48
SMARCC2-209ENST00000550164 PTGS1P23219 599 aa12.02□□□□□ -0.48
SMARCC2-209ENST00000550164 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.48
SMARCC2-209ENST00000550164 EVI5LQ96CN4 794 aa12.02□□□□□ -0.48
SMARCC2-209ENST00000550164 PODXL2Q9NZ53 605 aa12.02□□□□□ -0.48
SMARCC2-209ENST00000550164 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.48
SMARCC2-209ENST00000550164 CCDC94Q9BW85 323 aaPredicted RBP12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
SMARCC2-209ENST00000550164 CCT2P78371 535 aaKnown RBP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 FKBP4Q02790 459 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 RBM8AQ9Y5S9 174 aaKnown RBP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 BRD1O95696 1058 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 UBXN4Q92575 508 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 ZFYVE9O95405 1425 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 LUZP1Q86V48 1076 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 RIMS2Q9UQ26 1411 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 PNMA6EA0A0J9YXQ4 647 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 TYRO3Q06418 890 aa12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 V9GYY5 206 aaPredicted RBP12.01□□□□□ -0.49
SMARCC2-209ENST00000550164 PIK3R4Q99570 1358 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
SMARCC2-209ENST00000550164 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 BIN1O00499 593 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 ZNF500O60304 480 aaPredicted RBP12□□□□□ -0.49
SMARCC2-209ENST00000550164 TERF1P54274 439 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 CFAP100Q494V2 611 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 FSIP1Q8NA03 581 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
SMARCC2-209ENST00000550164 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 UGGT1Q9NYU2 1555 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 CHL1O00533 1208 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 HSP90B2PQ58FF3 399 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
SMARCC2-209ENST00000550164 ABCC1P33527 1531 aa11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 CCP110O43303 1012 aa11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms