RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 TNMDQ9H2S6 317 aa11.32□□□□□ -0.6
CALCOCO1-210ENST00000548263 CNPY2Q9Y2B0 182 aa11.32□□□□□ -0.6
CALCOCO1-210ENST00000548263 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
CALCOCO1-210ENST00000548263 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
CALCOCO1-210ENST00000548263 STX6O43752 255 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 PDCP20941 246 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.66e-6■□□□□ 8.3
CALCOCO1-210ENST00000548263 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 JARID2Q92833 1246 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 NPHP1O15259 732 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 DTNBO60941 627 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 PDCL2Q8N4E4 241 aa11.31□□□□□ -0.6
CALCOCO1-210ENST00000548263 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 PSMA5P28066 241 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 G2E3Q7L622 706 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 TBX22Q9Y458 520 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 SLC39A6Q13433 755 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 CKAP2LQ8IYA6 745 aa11.3□□□□□ -0.6
CALCOCO1-210ENST00000548263 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 SIL1Q9H173 461 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 ABCC4O15439 1325 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 TPM4P67936 248 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 TFIP11Q9UBB9 837 aaKnown RBP11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 CFAP74Q9C0B2 1584 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 UBE2HP62256 183 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 PLEKHO1Q53GL0 409 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 CCDC73Q6ZRK6 1079 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
CALCOCO1-210ENST00000548263 GADD45BO75293 160 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 CHMLP26374 656 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 KIF2CQ99661 725 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 MSH6P52701 1360 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 NEXNQ0ZGT2 675 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 GORABQ5T7V8 394 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 BLOC1S2Q6QNY1 142 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 A2ML1A8K2U0 1454 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 GJB2P29033 226 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 ANAPC15P60006 121 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 AACSQ86V21 672 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 SDF4Q9BRK5 362 aa11.28□□□□□ -0.6
CALCOCO1-210ENST00000548263 SETD1BQ9UPS6 1966 aaKnown RBP11.27□□□□□ -0.6
CALCOCO1-210ENST00000548263 RICTORQ6R327 1708 aa11.27□□□□□ -0.6
CALCOCO1-210ENST00000548263 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.6
CALCOCO1-210ENST00000548263 HOMER1Q86YM7 354 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 ANKRD24Q8TF21 1146 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 TSC1Q92574 1164 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 ATP8B2P98198 1209 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 NECAB1Q8N987 351 aa11.27□□□□□ -0.61
CALCOCO1-210ENST00000548263 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 CPA1P15085 419 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 INTS4Q96HW7 963 aaKnown RBP11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 GCP02774 474 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 HOXC9P31274 260 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 C16orf45Q96MC5 204 aaPredicted RBP11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 ADGRB3O60242 1522 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 RHPN1Q8TCX5 695 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
CALCOCO1-210ENST00000548263 ZNF500O60304 480 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 TCEANC2Q96MN5 208 aa11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 BRD1O95696 1058 aa11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 CHL1O00533 1208 aa11.25□□□□□ -0.61
CALCOCO1-210ENST00000548263 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms