RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CHD2O14647 1828 aaKnown RBP3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 CROCC2H7BZ55 1655 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 TERTO14746 1132 aaKnown RBP3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 FECHP22830 423 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 PLA2G2CQ5R387 149 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 IRF7Q92985 503 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 FAM122AQ96E09 287 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 THAP11Q96EK4 314 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 USB1Q9BQ65 265 aaKnown RBP3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 PRDM6Q9NQX0 595 aa3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 ZNF777Q9ULD5 760 aaPredicted RBP3.79□□□□□ -1.8
TRAV1-1-201ENST00000542354 ARHGEF28Q8N1W1 1705 aaKnown RBP3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 DHX29Q7Z478 1369 aaKnown RBP3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 POTECB2RU33 542 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 PLA2G5P39877 138 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 MMP16P51512 607 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 GPIHBP1Q8IV16 184 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 ORAI2Q96SN7 254 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 MCOLN1Q9GZU1 580 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 AMOTL2Q9Y2J4 779 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 WASF2Q9Y6W5 498 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 NEXMIFQ5QGS0 1516 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 ERVK-7P63135 1459 aa3.78□□□□□ -1.8
TRAV1-1-201ENST00000542354 SPATA31A5Q5VU36 1347 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 NPHP3Q7Z494 1330 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 SPATA31A7Q8IWB4 1347 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 KDM2BQ8NHM5 1336 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 SYCP2Q9BX26 1530 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 TULP4Q9NRJ4 1543 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 PLEKHG3A1L390 1219 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 TESPA1A2RU30 521 aaPredicted RBP3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 SEMA3EO15041 775 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 KDM4AO75164 1064 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 MAP2K1Q02750 393 aaPredicted RBP3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 NFX1Q12986 1120 aaKnown RBP3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 CCDC24Q8N4L8 307 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 KRI1Q8N9T8 703 aaKnown RBP3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 MRGPRX2Q96LB1 330 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 CACNA1GO43497 2377 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 CTTNBP2Q8WZ74 1663 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 ADGRL3Q9HAR2 1447 aa3.77□□□□□ -1.81
TRAV1-1-201ENST00000542354 PIK3R4Q99570 1358 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 FYCO1Q9BQS8 1478 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 DXOO77932 396 aaKnown RBP3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 SMPD1P17405 629 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 SOX10P56693 466 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 LCE2AQ5TA79 106 aaPredicted RBP3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 FAM160A2Q8N612 972 aaPredicted RBP3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 EHBP1Q8NDI1 1231 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 COL26A1Q96A83 441 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 BEGAINQ9BUH8 593 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 COL25A1Q9BXS0 654 aaPredicted RBP3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 RRAGCQ9HB90 399 aa3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 NXF1Q9UBU9 619 aaKnown RBP3.76□□□□□ -1.81
TRAV1-1-201ENST00000542354 C1orf167Q5SNV9 1468 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 LAMC1P11047 1609 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 SCARF1Q14162 830 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 RC3H1Q5TC82 1133 aaKnown RBP3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 NUTM1Q86Y26 1132 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 TSHZ2Q9NRE2 1034 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 BTG4Q9NY30 223 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 ATP1B4Q9UN42 357 aaPredicted RBP3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 CD2APQ9Y5K6 639 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 CLIP1P30622 1438 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 PRAG1Q86YV5 1406 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 PLEKHG1Q9ULL1 1385 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 EHBP1L1Q8N3D4 1523 aa3.75□□□□□ -1.81
TRAV1-1-201ENST00000542354 USP32Q8NFA0 1604 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 RNF225M0QZC1 329 aaPredicted RBP3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 FOXO3O43524 673 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 ALDH1A1P00352 501 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 NOS1P29475 1434 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 CLCN1P35523 988 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 VEGFBP49765 207 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 MAP2K5Q13163 448 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 DGKZQ13574 1117 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 IDI1Q13907 227 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 TXNRD1Q16881 649 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 ZSCAN1Q8NBB4 408 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 PRDM9Q9NQV7 894 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 NWD2Q9ULI1 1742 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 ADGRB3O60242 1522 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 LRPPRCP42704 1394 aaKnown RBP3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 CNTNAP1P78357 1384 aa3.74□□□□□ -1.81
TRAV1-1-201ENST00000542354 CDC42BPBQ9Y5S2 1711 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 C10orf71Q711Q0 1435 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 UNC79Q9P2D8 2635 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 CAPN5O15484 640 aaPredicted RBP3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 UPP2O95045 317 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 CD46P15529 392 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 JUNDP17535 347 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 XPCQ01831 940 aaPredicted RBP3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 ESCO1Q5FWF5 840 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 RBM26Q5T8P6 1007 aaKnown RBP3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 RNF19BQ6ZMZ0 732 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 RETREG3Q86VR2 466 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 NUDT12Q9BQG2 462 aa3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 RTN4Q9NQC3 1192 aaKnown RBP3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 CFAP65Q6ZU64 1925 aaKnown RBP3.73□□□□□ -1.81
TRAV1-1-201ENST00000542354 PXDNLA1KZ92 1463 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms