RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
LDHA-216ENST00000538451 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
LDHA-216ENST00000538451 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 ZKSCAN2Q63HK3 967 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 MARCH10Q8NA82 808 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 BCL9O00512 1426 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 FTSJ3Q8IY81 847 aaKnown RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
LDHA-216ENST00000538451 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
LDHA-216ENST00000538451 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
LDHA-216ENST00000538451 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 BCAR3O75815 825 aa12.87□□□□□ -0.35
LDHA-216ENST00000538451 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 ARHGAP45Q92619 1136 aa12.87□□□□□ -0.35
LDHA-216ENST00000538451 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 DBF4Q9UBU7 674 aaPredicted RBP12.87□□□□□ -0.35
LDHA-216ENST00000538451 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
LDHA-216ENST00000538451 PTPRCP08575 1304 aa12.86□□□□□ -0.35
LDHA-216ENST00000538451 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
LDHA-216ENST00000538451 SLC39A6Q13433 755 aa12.86□□□□□ -0.35
LDHA-216ENST00000538451 PIGBQ92521 554 aa12.86□□□□□ -0.35
LDHA-216ENST00000538451 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
LDHA-216ENST00000538451 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
LDHA-216ENST00000538451 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
LDHA-216ENST00000538451 AAMPQ13685 434 aa12.85□□□□□ -0.35
LDHA-216ENST00000538451 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
LDHA-216ENST00000538451 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
LDHA-216ENST00000538451 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
LDHA-216ENST00000538451 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
LDHA-216ENST00000538451 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
LDHA-216ENST00000538451 STARD3NLO95772 234 aa12.84□□□□□ -0.35
LDHA-216ENST00000538451 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
LDHA-216ENST00000538451 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
LDHA-216ENST00000538451 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
LDHA-216ENST00000538451 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
LDHA-216ENST00000538451 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
LDHA-216ENST00000538451 ERBB4Q15303 1308 aa12.83□□□□□ -0.35
LDHA-216ENST00000538451 PLSCR1O15162 318 aa12.83□□□□□ -0.36
LDHA-216ENST00000538451 KCNQ3O43525 872 aa12.83□□□□□ -0.36
LDHA-216ENST00000538451 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
LDHA-216ENST00000538451 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
LDHA-216ENST00000538451 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
LDHA-216ENST00000538451 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.36
LDHA-216ENST00000538451 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
LDHA-216ENST00000538451 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
LDHA-216ENST00000538451 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
LDHA-216ENST00000538451 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
LDHA-216ENST00000538451 PLIN1O60240 522 aa12.81□□□□□ -0.36
LDHA-216ENST00000538451 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDHA-216ENST00000538451 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
LDHA-216ENST00000538451 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
LDHA-216ENST00000538451 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
LDHA-216ENST00000538451 ITGB4P16144 1822 aa12.8□□□□□ -0.36
LDHA-216ENST00000538451 FKBP5Q13451 457 aaPredicted RBP12.8□□□□□ -0.36
LDHA-216ENST00000538451 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
LDHA-216ENST00000538451 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
LDHA-216ENST00000538451 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
LDHA-216ENST00000538451 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
LDHA-216ENST00000538451 RGL2O15211 777 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 FLIIQ13045 1269 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
LDHA-216ENST00000538451 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
LDHA-216ENST00000538451 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
LDHA-216ENST00000538451 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 RREB1Q92766 1687 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 KCNQ2O43526 872 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 TRIM27P14373 513 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
LDHA-216ENST00000538451 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
LDHA-216ENST00000538451 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
LDHA-216ENST00000538451 NHSQ6T4R5 1651 aa12.77□□□□□ -0.36
LDHA-216ENST00000538451 LOC102724428A0A0B4J2F2 783 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
LDHA-216ENST00000538451 SIK1P57059 783 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.37
LDHA-216ENST00000538451 NEXNQ0ZGT2 675 aa12.76□□□□□ -0.37
LDHA-216ENST00000538451 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
LDHA-216ENST00000538451 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
LDHA-216ENST00000538451 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
LDHA-216ENST00000538451 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms