RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CYP19A1P11511 503 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-206ENST00000536241 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-206ENST00000536241 G2E3Q7L622 706 aa14.75□□□□□ -0.05
CDCA3-206ENST00000536241 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
CDCA3-206ENST00000536241 DBF4Q9UBU7 674 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-206ENST00000536241 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
CDCA3-206ENST00000536241 MYL6BP14649 208 aa14.74□□□□□ -0.05
CDCA3-206ENST00000536241 RRP1P56182 461 aaKnown RBP14.74□□□□□ -0.05
CDCA3-206ENST00000536241 PROSER3Q2NL68 480 aa14.74□□□□□ -0.05
CDCA3-206ENST00000536241 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
CDCA3-206ENST00000536241 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-206ENST00000536241 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
CDCA3-206ENST00000536241 PLSCR1O15162 318 aa14.73□□□□□ -0.05
CDCA3-206ENST00000536241 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
CDCA3-206ENST00000536241 NBPF10Q6P3W6 841 aaKnown RBP14.73□□□□□ -0.05
CDCA3-206ENST00000536241 NBPF15Q8N660 670 aa14.73□□□□□ -0.05
CDCA3-206ENST00000536241 C5P01031 1676 aa14.73□□□□□ -0.05
CDCA3-206ENST00000536241 PROM2Q8N271 834 aa14.72□□□□□ -0.05
CDCA3-206ENST00000536241 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-206ENST00000536241 IPO8O15397 1037 aaKnown RBP14.71□□□□□ -0.05
CDCA3-206ENST00000536241 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
CDCA3-206ENST00000536241 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
CDCA3-206ENST00000536241 ZKSCAN2Q63HK3 967 aa14.71□□□□□ -0.05
CDCA3-206ENST00000536241 LINC00116Q8NCU8 138 aa14.71□□□□□ -0.05
CDCA3-206ENST00000536241 LRRC4BQ9NT99 713 aa14.71□□□□□ -0.05
CDCA3-206ENST00000536241 HYPKQ9NX55 129 aa14.71□□□□□ -0.05
CDCA3-206ENST00000536241 TNNQ9UQP3 1299 aa14.71□□□□□ -0.05
CDCA3-206ENST00000536241 KIF16BQ96L93 1317 aa14.71□□□□□ -0.06
CDCA3-206ENST00000536241 CRKLP46109 303 aaKnown RBP14.7□□□□□ -0.06
CDCA3-206ENST00000536241 FLIIQ13045 1269 aa14.7□□□□□ -0.06
CDCA3-206ENST00000536241 TXNRD1Q16881 649 aa14.7□□□□□ -0.06
CDCA3-206ENST00000536241 INTS5Q6P9B9 1019 aaKnown RBP14.7□□□□□ -0.06
CDCA3-206ENST00000536241 CLUAP1Q96AJ1 413 aa14.7□□□□□ -0.06
CDCA3-206ENST00000536241 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-206ENST00000536241 C20orf194Q5TEA3 1177 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 ATF7IPQ6VMQ6 1270 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 COPS6Q7L5N1 327 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 LRP10Q7Z4F1 713 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 ARHGAP45Q92619 1136 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 TRIM27P14373 513 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-206ENST00000536241 SF3B2Q13435 895 aaKnown RBP14.69□□□□□ -0.06
CDCA3-206ENST00000536241 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-206ENST00000536241 SLC27A3Q5K4L6 730 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 CCDC87Q9NVE4 849 aa14.69□□□□□ -0.06
CDCA3-206ENST00000536241 ZNF330Q9Y3S2 320 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-206ENST00000536241 CACNA1FO60840 1977 aa14.68□□□□□ -0.06
CDCA3-206ENST00000536241 LY75O60449 1722 aa14.68□□□□□ -0.06
CDCA3-206ENST00000536241 PTPRCP08575 1304 aa14.67□□□□□ -0.06
CDCA3-206ENST00000536241 TJP1Q07157 1748 aa14.67□□□□□ -0.06
CDCA3-206ENST00000536241 F6X3S4 739 aa14.67□□□□□ -0.06
CDCA3-206ENST00000536241 RC3H1Q5TC82 1133 aaKnown RBP14.67□□□□□ -0.06
CDCA3-206ENST00000536241 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
CDCA3-206ENST00000536241 PANK1Q8TE04 598 aa14.67□□□□□ -0.06
CDCA3-206ENST00000536241 API5Q9BZZ5 524 aaKnown RBP14.67□□□□□ -0.06
CDCA3-206ENST00000536241 RLBP1P12271 317 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 IL6STP40189 918 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-206ENST00000536241 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 EZH2Q15910 746 aaKnown RBP14.66□□□□□ -0.06
CDCA3-206ENST00000536241 TTLL7Q6ZT98 887 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 DEFB132Q7Z7B7 95 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 ARXQ96QS3 562 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 CAMKK2Q96RR4 588 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
CDCA3-206ENST00000536241 PI4KAP2A4QPH2 592 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 EIF5P55010 431 aaKnown RBP14.65□□□□□ -0.06
CDCA3-206ENST00000536241 ANKRD13DQ6ZTN6 518 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 SMIM5Q71RC9 77 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 PI4KAP1Q8N8J0 262 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 EP400Q96L91 3159 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 MYH14Q7Z406 1995 aaKnown RBP14.65□□□□□ -0.06
CDCA3-206ENST00000536241 CNTNAP4Q9C0A0 1308 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
CDCA3-206ENST00000536241 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 MS4A1P11836 297 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 BAG6P46379 1132 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 SLC4A10Q6U841 1118 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 RIC3Q7Z5B4 369 aa14.64□□□□□ -0.07
CDCA3-206ENST00000536241 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
CDCA3-206ENST00000536241 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
CDCA3-206ENST00000536241 GNPATO15228 680 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 DDX58O95786 925 aaKnown RBP14.63□□□□□ -0.07
CDCA3-206ENST00000536241 NEFLP07196 543 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 TMEM57Q8N5G2 664 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 TBC1D2BQ9UPU7 963 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 MAP3K2Q9Y2U5 619 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 COG6Q9Y2V7 657 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
CDCA3-206ENST00000536241 FKBP8Q14318 412 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 PLBD2Q8NHP8 589 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 DNAAF4Q8WXU2 420 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 CRBNQ96SW2 442 aa14.63□□□□□ -0.07
CDCA3-206ENST00000536241 RTCBQ9Y3I0 505 aaKnown RBP14.63□□□□□ -0.07
CDCA3-206ENST00000536241 HMGB2P26583 209 aaKnown RBP14.62□□□□□ -0.07
CDCA3-206ENST00000536241 ILDR2Q71H61 639 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms