RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 USP32Q8NFA0 1604 aa9.23□□□□□ -0.93
PABPC1-220ENST00000522658 RALGAPBQ86X10 1494 aa9.23□□□□□ -0.93
PABPC1-220ENST00000522658 TULP1O00294 542 aaPredicted RBP9.23□□□□□ -0.93
PABPC1-220ENST00000522658 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
PABPC1-220ENST00000522658 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 BAG6P46379 1132 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
PABPC1-220ENST00000522658 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 TECPR2O15040 1411 aa9.22□□□□□ -0.93
PABPC1-220ENST00000522658 SMPD1P17405 629 aa9.21□□□□□ -0.94
PABPC1-220ENST00000522658 KRT28Q7Z3Y7 464 aa9.21□□□□□ -0.94
PABPC1-220ENST00000522658 FMN2Q9NZ56 1722 aa9.21□□□□□ -0.94
PABPC1-220ENST00000522658 SPATA31A3Q5VYP0 1347 aa9.21□□□□□ -0.94
PABPC1-220ENST00000522658 AXIN1O15169 862 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 KRT27Q7Z3Y8 459 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 WAPLQ7Z5K2 1190 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 SEPT12Q8IYM1 358 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 ADGRF5Q8IZF2 1346 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 YTHDC2Q9H6S0 1430 aaKnown RBP9.2□□□□□ -0.94
PABPC1-220ENST00000522658 SLIT2O94813 1529 aa9.2□□□□□ -0.94
PABPC1-220ENST00000522658 CLCN1P35523 988 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
PABPC1-220ENST00000522658 SNIP1Q8TAD8 396 aaKnown RBP9.19□□□□□ -0.94
PABPC1-220ENST00000522658 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 POGKQ9P215 609 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
PABPC1-220ENST00000522658 DHX57Q6P158 1386 aaKnown RBP9.19□□□□□ -0.94
PABPC1-220ENST00000522658 ABCC11Q96J66 1382 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 GLI3P10071 1580 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 PLCH1Q4KWH8 1693 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
PABPC1-220ENST00000522658 EP400Q96L91 3159 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 TTC24A2A3L6 582 aaPredicted RBP9.18□□□□□ -0.94
PABPC1-220ENST00000522658 PIK3C2GO75747 1445 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 SAFB2Q14151 953 aaKnown RBP eCLIP9.18□□□□□ -0.94
PABPC1-220ENST00000522658 VPS72Q15906 364 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 TMEM132EQ6IEE7 984 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 DEFB132Q7Z7B7 95 aa9.18□□□□□ -0.94
PABPC1-220ENST00000522658 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
PABPC1-220ENST00000522658 GMPR2Q9P2T1 348 aaKnown RBP9.18□□□□□ -0.94
PABPC1-220ENST00000522658 NWD2Q9ULI1 1742 aa9.17□□□□□ -0.94
PABPC1-220ENST00000522658 SBNO1A3KN83 1393 aa9.17□□□□□ -0.94
PABPC1-220ENST00000522658 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
PABPC1-220ENST00000522658 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
PABPC1-220ENST00000522658 SKOR1P84550 965 aa9.17□□□□□ -0.94
PABPC1-220ENST00000522658 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
PABPC1-220ENST00000522658 LRP5O75197 1615 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 J3QL48 77 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 JUNDP17535 347 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
PABPC1-220ENST00000522658 ADGRB2O60241 1585 aa9.16□□□□□ -0.94
PABPC1-220ENST00000522658 CABLES1Q8TDN4 633 aa9.15□□□□□ -0.94
PABPC1-220ENST00000522658 PRAM1Q96QH2 718 aa9.15□□□□□ -0.94
PABPC1-220ENST00000522658 BRWD3Q6RI45 1802 aa9.15□□□□□ -0.95
PABPC1-220ENST00000522658 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 ANKARQ7Z5J8 1434 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 ABCA3Q99758 1704 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 WNT7BP56706 349 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 RETREG3Q86VR2 466 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 CCDC24Q8N4L8 307 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 BTG4Q9NY30 223 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 RGPD1P0DJD0 1748 aa9.14□□□□□ -0.95
PABPC1-220ENST00000522658 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
PABPC1-220ENST00000522658 NGDNQ8NEJ9 315 aaKnown RBP9.13□□□□□ -0.95
PABPC1-220ENST00000522658 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
PABPC1-220ENST00000522658 MPHOSPH9Q99550 1183 aa9.13□□□□□ -0.95
PABPC1-220ENST00000522658 PRDM11Q9NQV5 511 aa9.13□□□□□ -0.95
PABPC1-220ENST00000522658 COL14A1Q05707 1796 aaKnown RBP9.12□□□□□ -0.95
PABPC1-220ENST00000522658 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-220ENST00000522658 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
PABPC1-220ENST00000522658 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
PABPC1-220ENST00000522658 CFAP70Q5T0N1 1121 aa9.11□□□□□ -0.95
PABPC1-220ENST00000522658 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-220ENST00000522658 HPS1Q92902 700 aa9.11□□□□□ -0.95
PABPC1-220ENST00000522658 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-220ENST00000522658 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
PABPC1-220ENST00000522658 TULP4Q9NRJ4 1543 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-220ENST00000522658 FDX1P10109 184 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 HRCP23327 699 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-220ENST00000522658 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
PABPC1-220ENST00000522658 TRAK1Q9UPV9 953 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 NRAPQ86VF7 1730 aa9.1□□□□□ -0.95
PABPC1-220ENST00000522658 ITSN1Q15811 1721 aa9.09□□□□□ -0.95
PABPC1-220ENST00000522658 FAM83GA6ND36 823 aa9.09□□□□□ -0.95
PABPC1-220ENST00000522658 SIAH2O43255 324 aa9.09□□□□□ -0.95
PABPC1-220ENST00000522658 R3HDM1Q15032 1099 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms