RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 SIAH2O43255 324 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 Q3C1V9 767 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
PABPC1-207ENST00000518716 UNC5CLQ8IV45 518 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 KCTD17Q8N5Z5 321 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 GLI3P10071 1580 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 NPHP3Q7Z494 1330 aa9.23□□□□□ -0.93
PABPC1-207ENST00000518716 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.22□□□□□ -0.93
PABPC1-207ENST00000518716 RALGAPBQ86X10 1494 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 USB1Q9BQ65 265 aaKnown RBP9.22□□□□□ -0.93
PABPC1-207ENST00000518716 LRP5O75197 1615 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 CLTCL1P53675 1640 aa9.22□□□□□ -0.93
PABPC1-207ENST00000518716 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
PABPC1-207ENST00000518716 FOXO3O43524 673 aa9.21□□□□□ -0.94
PABPC1-207ENST00000518716 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
PABPC1-207ENST00000518716 SEMA3EO15041 775 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 SPATA31A3Q5VYP0 1347 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 CDC42BPGQ6DT37 1551 aa9.2□□□□□ -0.94
PABPC1-207ENST00000518716 BRWD3Q6RI45 1802 aa9.19□□□□□ -0.94
PABPC1-207ENST00000518716 GNPATO15228 680 aa9.19□□□□□ -0.94
PABPC1-207ENST00000518716 GPR37O15354 613 aa9.19□□□□□ -0.94
PABPC1-207ENST00000518716 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
PABPC1-207ENST00000518716 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
PABPC1-207ENST00000518716 TECPR2O15040 1411 aa9.18□□□□□ -0.94
PABPC1-207ENST00000518716 VSIG8P0DPA2 414 aa9.18□□□□□ -0.94
PABPC1-207ENST00000518716 HRCP23327 699 aa9.18□□□□□ -0.94
PABPC1-207ENST00000518716 XPCQ01831 940 aaPredicted RBP9.18□□□□□ -0.94
PABPC1-207ENST00000518716 VPS72Q15906 364 aa9.18□□□□□ -0.94
PABPC1-207ENST00000518716 LRPPRCP42704 1394 aaKnown RBP9.17□□□□□ -0.94
PABPC1-207ENST00000518716 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
PABPC1-207ENST00000518716 NAIPQ13075 1403 aa9.16□□□□□ -0.94
PABPC1-207ENST00000518716 ABCC11Q96J66 1382 aa9.16□□□□□ -0.94
PABPC1-207ENST00000518716 HLA-CQ95604 372 aa9.16□□□□□ -0.94
PABPC1-207ENST00000518716 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
PABPC1-207ENST00000518716 KIF1BO60333 1816 aa9.16□□□□□ -0.94
PABPC1-207ENST00000518716 KRT27Q7Z3Y8 459 aa9.15□□□□□ -0.94
PABPC1-207ENST00000518716 WAPLQ7Z5K2 1190 aa9.15□□□□□ -0.94
PABPC1-207ENST00000518716 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
PABPC1-207ENST00000518716 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
PABPC1-207ENST00000518716 PLEKHH1Q9ULM0 1364 aa9.14□□□□□ -0.95
PABPC1-207ENST00000518716 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
PABPC1-207ENST00000518716 KRT28Q7Z3Y7 464 aa9.14□□□□□ -0.95
PABPC1-207ENST00000518716 PPLO60437 1756 aa9.14□□□□□ -0.95
PABPC1-207ENST00000518716 ADGRF5Q8IZF2 1346 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 FAM83GA6ND36 823 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 SOBPA7XYQ1 873 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 NWD2Q9ULI1 1742 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 DISP2A7MBM2 1401 aa9.13□□□□□ -0.95
PABPC1-207ENST00000518716 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
PABPC1-207ENST00000518716 CD46P15529 392 aa9.12□□□□□ -0.95
PABPC1-207ENST00000518716 ITGAEP38570 1179 aa9.12□□□□□ -0.95
PABPC1-207ENST00000518716 SF3B2Q13435 895 aaKnown RBP9.12□□□□□ -0.95
PABPC1-207ENST00000518716 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
PABPC1-207ENST00000518716 TNS3Q68CZ2 1445 aa9.12□□□□□ -0.95
PABPC1-207ENST00000518716 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
PABPC1-207ENST00000518716 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
PABPC1-207ENST00000518716 KDM4AO75164 1064 aa9.1□□□□□ -0.95
PABPC1-207ENST00000518716 BAG6P46379 1132 aa9.1□□□□□ -0.95
PABPC1-207ENST00000518716 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
PABPC1-207ENST00000518716 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
PABPC1-207ENST00000518716 SPATA31E1Q6ZUB1 1445 aa9.1□□□□□ -0.95
PABPC1-207ENST00000518716 NRXN1Q9ULB1 1477 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 RRBP1Q9P2E9 1410 aaKnown RBP9.09□□□□□ -0.95
PABPC1-207ENST00000518716 JUNDP17535 347 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 SH3BP2P78314 561 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 PURBQ96QR8 312 aaKnown RBP9.09□□□□□ -0.95
PABPC1-207ENST00000518716 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 STK26Q9P289 416 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 PLCH1Q4KWH8 1693 aa9.09□□□□□ -0.95
PABPC1-207ENST00000518716 KNDC1Q76NI1 1749 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 ABCA3Q99758 1704 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
PABPC1-207ENST00000518716 RASSF7Q02833 373 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 PSME1Q06323 249 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 R3HDM1Q15032 1099 aaKnown RBP9.08□□□□□ -0.96
PABPC1-207ENST00000518716 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 ANKRD30BQ9BXX2 1392 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
PABPC1-207ENST00000518716 SPATA31A5Q5VU36 1347 aa9.07□□□□□ -0.96
PABPC1-207ENST00000518716 SPATA31A7Q8IWB4 1347 aa9.07□□□□□ -0.96
PABPC1-207ENST00000518716 GDF11O95390 407 aa9.07□□□□□ -0.96
PABPC1-207ENST00000518716 C14orf93Q9H972 538 aaKnown RBP9.07□□□□□ -0.96
PABPC1-207ENST00000518716 RGPD8O14715 1765 aaPredicted RBP9.07□□□□□ -0.96
PABPC1-207ENST00000518716 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
PABPC1-207ENST00000518716 EZH2Q15910 746 aaKnown RBP9.06□□□□□ -0.96
PABPC1-207ENST00000518716 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms