RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 CPS1P31327 1500 aa18.2■□□□□ 0.5
PCM1-204ENST00000517730 AP5Z1O43299 807 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 AK2P54819 239 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 SGSM2O43147 1006 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 TAF3Q5VWG9 929 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
PCM1-204ENST00000517730 STK31Q9BXU1 1019 aa18.19■□□□□ 0.5
PCM1-204ENST00000517730 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
PCM1-204ENST00000517730 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
PCM1-204ENST00000517730 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
PCM1-204ENST00000517730 NEO1Q92859 1461 aa18.18■□□□□ 0.5
PCM1-204ENST00000517730 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
PCM1-204ENST00000517730 C3P01024 1663 aa18.18■□□□□ 0.5
PCM1-204ENST00000517730 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 SPDYE4A6NLX3 237 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 RAB11FIP3O75154 756 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCM1-204ENST00000517730 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.56e-8■■■■□ 24.1
PCM1-204ENST00000517730 SPC24Q8NBT2 197 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
PCM1-204ENST00000517730 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
PCM1-204ENST00000517730 IL25Q9H293 177 aa18.16■□□□□ 0.5
PCM1-204ENST00000517730 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
PCM1-204ENST00000517730 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
PCM1-204ENST00000517730 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
PCM1-204ENST00000517730 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
PCM1-204ENST00000517730 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
PCM1-204ENST00000517730 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
PCM1-204ENST00000517730 SH2B1Q9NRF2 756 aaPredicted RBP18.15■□□□□ 0.5
PCM1-204ENST00000517730 MTMR6Q9Y217 621 aa18.15■□□□□ 0.5
PCM1-204ENST00000517730 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
PCM1-204ENST00000517730 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 AKAP12Q02952 1782 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 GABPB1Q06547 395 aaPredicted RBP18.14■□□□□ 0.49
PCM1-204ENST00000517730 NCBP1Q09161 790 aaKnown RBP18.14■□□□□ 0.49
PCM1-204ENST00000517730 FLIIQ13045 1269 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 MAP3K11Q16584 847 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 CNTROBQ8N137 903 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 PAXBP1Q9Y5B6 917 aa18.14■□□□□ 0.49
PCM1-204ENST00000517730 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
PCM1-204ENST00000517730 PTGS1P23219 599 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 GJB2P29033 226 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.13■□□□□ 0.49
PCM1-204ENST00000517730 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
PCM1-204ENST00000517730 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 TTC21BQ7Z4L5 1316 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 NUP62CLQ9H1M0 184 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
PCM1-204ENST00000517730 SETD1AO15047 1707 aaKnown RBP18.13■□□□□ 0.49
PCM1-204ENST00000517730 XRN1Q8IZH2 1706 aaKnown RBP18.13■□□□□ 0.49
PCM1-204ENST00000517730 ELP1O95163 1332 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 CCDC171Q6TFL3 1326 aa18.12■□□□□ 0.49
PCM1-204ENST00000517730 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
PCM1-204ENST00000517730 TM6SF1Q9BZW5 370 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 KRT85P78386 507 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 TYRO3Q06418 890 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 IL1RAPL2Q9NP60 686 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 MRVI1Q9Y6F6 885 aa18.11■□□□□ 0.49
PCM1-204ENST00000517730 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
PCM1-204ENST00000517730 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
PCM1-204ENST00000517730 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
PCM1-204ENST00000517730 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
PCM1-204ENST00000517730 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
PCM1-204ENST00000517730 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
PCM1-204ENST00000517730 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
PCM1-204ENST00000517730 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
PCM1-204ENST00000517730 KIF1BPQ96EK5 621 aa18.09■□□□□ 0.49
PCM1-204ENST00000517730 LARGE1O95461 756 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 TNNT1P13805 278 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 POLA2Q14181 598 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 DRC7Q8IY82 874 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 CCDC112Q8NEF3 446 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 RHPN1Q8TCX5 695 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 SIRT1Q96EB6 747 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 USP44Q9H0E7 712 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 ZSWIM6Q9HCJ5 1215 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.49
PCM1-204ENST00000517730 CYP46A1Q9Y6A2 500 aa18.08■□□□□ 0.49
PCM1-204ENST00000517730 MAP3K5Q99683 1374 aa18.08■□□□□ 0.48
PCM1-204ENST00000517730 VPS37CA5D8V6 355 aaPredicted RBP18.08■□□□□ 0.48
PCM1-204ENST00000517730 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
PCM1-204ENST00000517730 ZNF771Q7L3S4 317 aaPredicted RBP18.08■□□□□ 0.48
PCM1-204ENST00000517730 PLA2G4DQ86XP0 818 aa18.08■□□□□ 0.48
PCM1-204ENST00000517730 KCNB2Q92953 911 aa18.08■□□□□ 0.48
PCM1-204ENST00000517730 HTATSF1O43719 755 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms