RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.19
PFDN1-204ENST00000512707 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
PFDN1-204ENST00000512707 PSDA5PKW4 1024 aaPredicted RBP13.89□□□□□ -0.19
PFDN1-204ENST00000512707 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
PFDN1-204ENST00000512707 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
PFDN1-204ENST00000512707 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
PFDN1-204ENST00000512707 STARD3NLO95772 234 aa13.88□□□□□ -0.19
PFDN1-204ENST00000512707 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
PFDN1-204ENST00000512707 BCL2L13Q9BXK5 485 aa13.88□□□□□ -0.19
PFDN1-204ENST00000512707 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
PFDN1-204ENST00000512707 TRIM37O94972 964 aa13.87□□□□□ -0.19
PFDN1-204ENST00000512707 MS4A1P11836 297 aa13.87□□□□□ -0.19
PFDN1-204ENST00000512707 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
PFDN1-204ENST00000512707 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
PFDN1-204ENST00000512707 BTAF1O14981 1849 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 BCAR3O75815 825 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
PFDN1-204ENST00000512707 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
PFDN1-204ENST00000512707 SIK1P57059 783 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 EN1Q05925 392 aaPredicted RBP13.86□□□□□ -0.19
PFDN1-204ENST00000512707 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
PFDN1-204ENST00000512707 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
PFDN1-204ENST00000512707 SBF2Q86WG5 1849 aa13.85□□□□□ -0.19
PFDN1-204ENST00000512707 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
PFDN1-204ENST00000512707 ZKSCAN2Q63HK3 967 aa13.85□□□□□ -0.19
PFDN1-204ENST00000512707 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
PFDN1-204ENST00000512707 HYPKQ9NX55 129 aa13.85□□□□□ -0.19
PFDN1-204ENST00000512707 TCERG1O14776 1098 aaKnown RBP13.84□□□□□ -0.19
PFDN1-204ENST00000512707 MRPL50Q8N5N7 158 aaKnown RBP13.84□□□□□ -0.19
PFDN1-204ENST00000512707 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
PFDN1-204ENST00000512707 C5P01031 1676 aa13.84□□□□□ -0.19
PFDN1-204ENST00000512707 RREB1Q92766 1687 aa13.84□□□□□ -0.19
PFDN1-204ENST00000512707 PTPRCP08575 1304 aa13.84□□□□□ -0.19
PFDN1-204ENST00000512707 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
PFDN1-204ENST00000512707 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
PFDN1-204ENST00000512707 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
PFDN1-204ENST00000512707 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.2
PFDN1-204ENST00000512707 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
PFDN1-204ENST00000512707 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
PFDN1-204ENST00000512707 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
PFDN1-204ENST00000512707 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
PFDN1-204ENST00000512707 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
PFDN1-204ENST00000512707 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
PFDN1-204ENST00000512707 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
PFDN1-204ENST00000512707 APBA3O96018 575 aa13.82□□□□□ -0.2
PFDN1-204ENST00000512707 FKBP8Q14318 412 aa13.82□□□□□ -0.2
PFDN1-204ENST00000512707 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
PFDN1-204ENST00000512707 NOB1Q9ULX3 412 aaKnown RBP13.82□□□□□ -0.2
PFDN1-204ENST00000512707 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
PFDN1-204ENST00000512707 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
PFDN1-204ENST00000512707 FLIIQ13045 1269 aa13.81□□□□□ -0.2
PFDN1-204ENST00000512707 FKBP5Q13451 457 aaPredicted RBP13.81□□□□□ -0.2
PFDN1-204ENST00000512707 PDE3AQ14432 1141 aa13.81□□□□□ -0.2
PFDN1-204ENST00000512707 R3HDM1Q15032 1099 aaKnown RBP13.81□□□□□ -0.2
PFDN1-204ENST00000512707 ATF7IPQ6VMQ6 1270 aa13.81□□□□□ -0.2
PFDN1-204ENST00000512707 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
PFDN1-204ENST00000512707 CYP19A1P11511 503 aaPredicted RBP13.8□□□□□ -0.2
PFDN1-204ENST00000512707 MYL6BP14649 208 aa13.8□□□□□ -0.2
PFDN1-204ENST00000512707 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
PFDN1-204ENST00000512707 TJP1Q07157 1748 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 PLSCR1O15162 318 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 PLIN1O60240 522 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
PFDN1-204ENST00000512707 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
PFDN1-204ENST00000512707 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 CAMKK2Q96RR4 588 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
PFDN1-204ENST00000512707 A1BGP04217 495 aa13.78□□□□□ -0.2
PFDN1-204ENST00000512707 TRIM27P14373 513 aa13.78□□□□□ -0.2
PFDN1-204ENST00000512707 CRKLP46109 303 aaKnown RBP13.78□□□□□ -0.2
PFDN1-204ENST00000512707 ITPK1Q13572 414 aa13.78□□□□□ -0.2
PFDN1-204ENST00000512707 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-204ENST00000512707 CNTNAP4Q9C0A0 1308 aa13.78□□□□□ -0.2
PFDN1-204ENST00000512707 LY75O60449 1722 aa13.78□□□□□ -0.2
PFDN1-204ENST00000512707 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-204ENST00000512707 PDIA6Q15084 440 aa13.77□□□□□ -0.21
PFDN1-204ENST00000512707 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
PFDN1-204ENST00000512707 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
PFDN1-204ENST00000512707 A0A087WZG4 1122 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 ANXA1P04083 346 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
PFDN1-204ENST00000512707 TXNRD1Q16881 649 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 RC3H1Q5TC82 1133 aaKnown RBP13.76□□□□□ -0.21
PFDN1-204ENST00000512707 G2E3Q7L622 706 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 XAGE3Q8WTP9 111 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 CLUAP1Q96AJ1 413 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 AK7Q96M32 723 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
PFDN1-204ENST00000512707 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-204ENST00000512707 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
PFDN1-204ENST00000512707 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-204ENST00000512707 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
PFDN1-204ENST00000512707 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
PFDN1-204ENST00000512707 KSR2Q6VAB6 950 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms