RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HDXQ7Z353 690 aa8.47□□□□□ -1.05
UBE2D3-224ENST00000508474 OTUD6BQ8N6M0 293 aa8.47□□□□□ -1.05
UBE2D3-224ENST00000508474 RSRC1Q96IZ7 334 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-224ENST00000508474 INTS4Q96HW7 963 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-224ENST00000508474 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
UBE2D3-224ENST00000508474 DAPK1P53355 1430 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 IGSF3O75054 1194 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 TRIM27P14373 513 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 NFE2L2Q16236 605 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 PRPF40BQ6NWY9 871 aaKnown RBP8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 CPSF2Q9P2I0 782 aaKnown RBP8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 CCDC69A6NI79 296 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 RIOK3O14730 519 aaKnown RBP8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 MCM6Q14566 821 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 FKBP15Q5T1M5 1219 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 RBSNQ9H1K0 784 aa8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 PHAXQ9H814 394 aaKnown RBP8.46□□□□□ -1.05
UBE2D3-224ENST00000508474 RNF123Q5XPI4 1314 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 CABP2Q9NPB3 220 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 VPS18Q9P253 973 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 IL16Q14005 1332 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 TUBB2AQ13885 445 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC158Q5M9N0 1113 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 MSL1Q68DK7 614 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC121Q6ZUS5 278 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 TUBB2BQ9BVA1 445 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 TCEAL9Q9UHQ7 104 aa8.46□□□□□ -1.06
UBE2D3-224ENST00000508474 RPRD2Q5VT52 1461 aaKnown RBP8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 B4GALNT4Q76KP1 1039 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 AACSQ86V21 672 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 JPH4Q96JJ6 628 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 SRGAP3O43295 1099 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 KANK3Q6NY19 840 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC50Q8IVM0 306 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 PTGS1P23219 599 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 TYRO3Q06418 890 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 ARFGAP2Q8N6H7 521 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 SYNJ1O43426 1573 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 F13A1P00488 732 aa8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC43Q96MW1 224 aaKnown RBP8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 U3KPZ7 1027 aaPredicted RBP8.45□□□□□ -1.06
UBE2D3-224ENST00000508474 NCAPD3P42695 1498 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 SPATA24Q86W54 205 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 CNNM3Q8NE01 707 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 ARHGAP45Q92619 1136 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 ZFP91Q96JP5 570 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 C8orf76Q96K31 380 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 CFAP70Q5T0N1 1121 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 CTAGE1Q96RT6 745 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 CNPY2Q9Y2B0 182 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 MAPKBP1O60336 1514 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 ANKRD62A6NC57 917 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 FGFR1OPO95684 399 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 UBASH3AP57075 661 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 MAATS1Q7Z4T9 603 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 ZMYM3Q14202 1370 aa8.44□□□□□ -1.06
UBE2D3-224ENST00000508474 CTAGE9A4FU28 777 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 MLECQ14165 292 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 SPECC1Q5M775 1068 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 GTF3C6Q969F1 213 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 PYM1Q9BRP8 204 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 TAOK3Q9H2K8 898 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 IL1RAPL2Q9NP60 686 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 C9orf84Q5VXU9 1444 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 DNAJC21Q5F1R6 531 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 FAM76AQ8TAV0 307 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 HMG20BQ9P0W2 317 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 EXOC6BQ9Y2D4 811 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 HECW1Q76N89 1606 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 SYT1P21579 422 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 C6orf163Q5TEZ5 329 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 CEP57Q86XR8 500 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 PAIP2Q9BPZ3 127 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 SLC12A5Q9H2X9 1139 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 BCCIPQ9P287 314 aaKnown RBP eCLIP8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 PTPRCP08575 1304 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 AQRO60306 1485 aaKnown RBP eCLIP8.43□□□□□ -1.062e-7■■■□□ 15.8
UBE2D3-224ENST00000508474 GOLIM4O00461 696 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 SMARCA5O60264 1052 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms