RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 SKILP12757 684 aa13.57□□□□□ -0.24
MACF1-225ENST00000497807 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
MACF1-225ENST00000497807 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
MACF1-225ENST00000497807 BECN1Q14457 450 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 PUS10Q3MIT2 529 aaKnown RBP13.56□□□□□ -0.24
MACF1-225ENST00000497807 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 TESK2Q96S53 571 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 INHBEP58166 350 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 LONRF3Q496Y0 759 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 CDK19Q9BWU1 502 aa13.56□□□□□ -0.24
MACF1-225ENST00000497807 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 MSH6P52701 1360 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 PAX3P23760 479 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
MACF1-225ENST00000497807 NAT1P18440 290 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 ARPC5LQ9BPX5 153 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 CPS1P31327 1500 aa13.55□□□□□ -0.24
MACF1-225ENST00000497807 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 XRN1Q8IZH2 1706 aaKnown RBP13.54□□□□□ -0.24
MACF1-225ENST00000497807 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
MACF1-225ENST00000497807 FAM163BP0C2L3 166 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 PPP2R5AQ15172 486 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
MACF1-225ENST00000497807 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 TMF1P82094 1093 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
MACF1-225ENST00000497807 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
MACF1-225ENST00000497807 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
MACF1-225ENST00000497807 SMAPO00193 183 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 EXOC5O00471 708 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 PPFIA4O75335 1185 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 ATP6V1AP38606 617 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 MAGEA8P43361 318 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 TERF2Q15554 542 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 SUN2Q9UH99 717 aa13.52□□□□□ -0.24
MACF1-225ENST00000497807 CASQ1P31415 396 aa13.52□□□□□ -0.25
MACF1-225ENST00000497807 MCM5P33992 734 aa13.52□□□□□ -0.25
MACF1-225ENST00000497807 RAD51AP2Q09MP3 1159 aa13.52□□□□□ -0.25
MACF1-225ENST00000497807 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
MACF1-225ENST00000497807 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 IL16Q14005 1332 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 ADGRL3Q9HAR2 1447 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 CAND2O75155 1236 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
MACF1-225ENST00000497807 JRKLQ9Y4A0 524 aa13.51□□□□□ -0.25
MACF1-225ENST00000497807 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
MACF1-225ENST00000497807 PIP4K2BP78356 416 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 ZNF232Q9UNY5 417 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 CCP110O43303 1012 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
MACF1-225ENST00000497807 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
MACF1-225ENST00000497807 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
MACF1-225ENST00000497807 TOM1O60784 492 aa13.49□□□□□ -0.25
MACF1-225ENST00000497807 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
MACF1-225ENST00000497807 MFSD4BQ5TF39 518 aa13.49□□□□□ -0.25
MACF1-225ENST00000497807 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
MACF1-225ENST00000497807 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
MACF1-225ENST00000497807 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
MACF1-225ENST00000497807 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
MACF1-225ENST00000497807 ZNF396Q96N95 335 aaPredicted RBP13.49□□□□□ -0.25
MACF1-225ENST00000497807 CHCHD3Q9NX63 227 aaKnown RBP13.49□□□□□ -0.25
MACF1-225ENST00000497807 DISP3Q9P2K9 1392 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 ORAI2Q96SN7 254 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
MACF1-225ENST00000497807 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
MACF1-225ENST00000497807 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 TOMM22Q9NS69 142 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
MACF1-225ENST00000497807 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
MACF1-225ENST00000497807 FAM200BP0CF97 657 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
MACF1-225ENST00000497807 TATDN2Q93075 761 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
MACF1-225ENST00000497807 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms