RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CUL4AQ13619 759 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 C16orf45Q96MC5 204 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-211ENST00000486901 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
HSPG2-211ENST00000486901 ZFYVE9O95405 1425 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 A0A0G2JS52 829 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 PTGS1P23219 599 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 NRBP1Q9UHY1 535 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
HSPG2-211ENST00000486901 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 ZSCAN22P10073 491 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-211ENST00000486901 PTH1RQ03431 593 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 CCDC183Q5T5S1 534 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.03
HSPG2-211ENST00000486901 V9GYY5 206 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-211ENST00000486901 SIGLEC1Q9BZZ2 1709 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 ACEP12821 1306 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 METP08581 1390 aa14.87□□□□□ -0.03
HSPG2-211ENST00000486901 MYRIPQ8NFW9 859 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 USP44Q9H0E7 712 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 PTPRCP08575 1304 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
HSPG2-211ENST00000486901 KIF3AQ9Y496 699 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 CPS1P31327 1500 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 PHF14O94880 888 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 DDX11Q96FC9 970 aa14.86□□□□□ -0.03
HSPG2-211ENST00000486901 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-211ENST00000486901 ATP8B2P98198 1209 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 NDUFB9Q9Y6M9 179 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 KDM4AO75164 1064 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 SYTL4Q96C24 671 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-211ENST00000486901 SIL1Q9H173 461 aa14.85□□□□□ -0.03
HSPG2-211ENST00000486901 HDGFL1Q5TGJ6 251 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 EYA1Q99502 592 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 RPAP1Q9BWH6 1393 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-211ENST00000486901 F13A1P00488 732 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 LIG1P18858 919 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 MCM2P49736 904 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 TAF7Q15545 349 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-211ENST00000486901 ERCC4Q92889 916 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-211ENST00000486901 CCDC94Q9BW85 323 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-211ENST00000486901 DIAPH3Q9NSV4 1193 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 RHPN1Q8TCX5 695 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 ZBTB9Q96C00 473 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 TAF6LQ9Y6J9 622 aa14.84□□□□□ -0.03
HSPG2-211ENST00000486901 KCNQ3O43525 872 aa14.83□□□□□ -0.03
HSPG2-211ENST00000486901 GNAI3P08754 354 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 MCM5P33992 734 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 HSPA4P34932 840 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-211ENST00000486901 TTC21BQ7Z4L5 1316 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 NEURL4Q96JN8 1562 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 NGDNQ8NEJ9 315 aaKnown RBP14.83□□□□□ -0.04
HSPG2-211ENST00000486901 OSBPL3Q9H4L5 887 aa14.83□□□□□ -0.04
HSPG2-211ENST00000486901 CHGBP05060 677 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 CCDC186Q7Z3E2 898 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 LIMCH1Q9UPQ0 1083 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 CCDC8Q9H0W5 538 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-211ENST00000486901 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-211ENST00000486901 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 GOLGA6L4A6NEF3 574 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 TERF1P54274 439 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 CDC37L1Q7L3B6 337 aa14.82□□□□□ -0.04
HSPG2-211ENST00000486901 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
HSPG2-211ENST00000486901 PI4KAP2A4QPH2 592 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-211ENST00000486901 UBE2HP62256 183 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 CCDC30Q5VVM6 783 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 PI4KAP1Q8N8J0 262 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
HSPG2-211ENST00000486901 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 AIMP1Q12904 312 aaKnown RBP14.81□□□□□ -0.04
HSPG2-211ENST00000486901 ARID5BQ14865 1188 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
HSPG2-211ENST00000486901 TRIM5Q9C035 493 aa14.81□□□□□ -0.04
HSPG2-211ENST00000486901 SGSM2O43147 1006 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 ME3Q16798 604 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 SALL3Q9BXA9 1300 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 ZSCAN20P17040 1043 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-211ENST00000486901 NLRP6P59044 892 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 TTC6Q86TZ1 520 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 DACT1Q9NYF0 836 aa14.8□□□□□ -0.04
HSPG2-211ENST00000486901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-211ENST00000486901 IL17REQ8NFR9 667 aa14.79□□□□□ -0.04
HSPG2-211ENST00000486901 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
HSPG2-211ENST00000486901 LMTK2Q8IWU2 1503 aa14.79□□□□□ -0.04
HSPG2-211ENST00000486901 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-211ENST00000486901 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
HSPG2-211ENST00000486901 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
HSPG2-211ENST00000486901 EDC4Q6P2E9 1401 aaKnown RBP14.79□□□□□ -0.04
HSPG2-211ENST00000486901 PI4K2BQ8TCG2 481 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms