RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 ITGB4P16144 1822 aa15.09■□□□□ 0.01
CBWD3-206ENST00000478048 TRIM37O94972 964 aa15.09■□□□□ 0.01
CBWD3-206ENST00000478048 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-206ENST00000478048 THUMPD2Q9BTF0 503 aaKnown RBP15.09■□□□□ 0.01
CBWD3-206ENST00000478048 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-206ENST00000478048 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0.01
CBWD3-206ENST00000478048 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
CBWD3-206ENST00000478048 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
CBWD3-206ENST00000478048 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
CBWD3-206ENST00000478048 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
CBWD3-206ENST00000478048 PSEN1P49768 467 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 NHSQ6T4R5 1651 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 NFATC2IPQ8NCF5 419 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 PIGBQ92521 554 aa15.06■□□□□ 0
CBWD3-206ENST00000478048 CABP4P57796 275 aa15.04■□□□□ -0
CBWD3-206ENST00000478048 BCL11BQ9C0K0 894 aaPredicted RBP15.04■□□□□ -0
CBWD3-206ENST00000478048 SLC52A2Q9HAB3 445 aa15.04■□□□□ -0
CBWD3-206ENST00000478048 MRC1P22897 1456 aa15.04■□□□□ -0
CBWD3-206ENST00000478048 BTAF1O14981 1849 aa15.04■□□□□ -0
CBWD3-206ENST00000478048 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
CBWD3-206ENST00000478048 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
CBWD3-206ENST00000478048 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
CBWD3-206ENST00000478048 TEFQ10587 303 aa15.03■□□□□ -0
CBWD3-206ENST00000478048 PDAP1Q13442 181 aaKnown RBP15.03■□□□□ -0
CBWD3-206ENST00000478048 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
CBWD3-206ENST00000478048 WWC1Q8IX03 1113 aa15.02□□□□□ -0.01
CBWD3-206ENST00000478048 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
CBWD3-206ENST00000478048 UPF1Q92900 1129 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBWD3-206ENST00000478048 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
CBWD3-206ENST00000478048 SLC39A6Q13433 755 aa15□□□□□ -0.01
CBWD3-206ENST00000478048 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
CBWD3-206ENST00000478048 EIF2AK3Q9NZJ5 1116 aaKnown RBP15□□□□□ -0.01
CBWD3-206ENST00000478048 APBA3O96018 575 aa15□□□□□ -0.01
CBWD3-206ENST00000478048 ATG3Q9NT62 314 aa15□□□□□ -0.01
CBWD3-206ENST00000478048 HNRNPUQ00839 825 aaKnown RBP eCLIP14.99□□□□□ -0.01
CBWD3-206ENST00000478048 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-206ENST00000478048 PDCD7Q8N8D1 485 aaKnown RBP14.99□□□□□ -0.01
CBWD3-206ENST00000478048 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
CBWD3-206ENST00000478048 KCNQ3O43525 872 aa14.98□□□□□ -0.01
CBWD3-206ENST00000478048 DEFB132Q7Z7B7 95 aa14.97□□□□□ -0.01
CBWD3-206ENST00000478048 L3MBTL3Q96JM7 780 aaPredicted RBP14.97□□□□□ -0.01
CBWD3-206ENST00000478048 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
CBWD3-206ENST00000478048 ZNF521Q96K83 1311 aa14.97□□□□□ -0.01
CBWD3-206ENST00000478048 PAPPAQ13219 1627 aa14.97□□□□□ -0.01
CBWD3-206ENST00000478048 SF3B2Q13435 895 aaKnown RBP14.97□□□□□ -0.01
CBWD3-206ENST00000478048 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
CBWD3-206ENST00000478048 PALLDQ8WX93 1383 aa14.96□□□□□ -0.01
CBWD3-206ENST00000478048 EN1Q05925 392 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-206ENST00000478048 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
CBWD3-206ENST00000478048 PLSCR1O15162 318 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
CBWD3-206ENST00000478048 ZNF853P0CG23 659 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 KCNQ4P56696 695 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 ZNF790Q6PG37 636 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 KDM3BQ7LBC6 1761 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 CHL1O00533 1208 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
CBWD3-206ENST00000478048 LY75O60449 1722 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 SNPHO15079 494 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 BAG6P46379 1132 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 EZH2Q15910 746 aaKnown RBP14.94□□□□□ -0.02
CBWD3-206ENST00000478048 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
CBWD3-206ENST00000478048 SLC4A9Q96Q91 983 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
CBWD3-206ENST00000478048 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
CBWD3-206ENST00000478048 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
CBWD3-206ENST00000478048 TTC5Q8N0Z6 440 aa14.93□□□□□ -0.02
CBWD3-206ENST00000478048 ZNF496Q96IT1 587 aaPredicted RBP14.93□□□□□ -0.02
CBWD3-206ENST00000478048 MBIPQ9NS73 344 aa14.93□□□□□ -0.02
CBWD3-206ENST00000478048 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
CBWD3-206ENST00000478048 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 SIK1P57059 783 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
CBWD3-206ENST00000478048 CDCA7LQ96GN5 454 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
CBWD3-206ENST00000478048 IL16Q14005 1332 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 ST18O60284 1047 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 GNAI1P63096 354 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 TXNRD1Q16881 649 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 LRRC4BQ9NT99 713 aa14.92□□□□□ -0.02
CBWD3-206ENST00000478048 RGPD3A6NKT7 1758 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-206ENST00000478048 RGPD4Q7Z3J3 1758 aa14.91□□□□□ -0.02
CBWD3-206ENST00000478048 EIF4A1P60842 406 aaKnown RBP14.91□□□□□ -0.02
CBWD3-206ENST00000478048 KRT24Q2M2I5 525 aa14.91□□□□□ -0.02
CBWD3-206ENST00000478048 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
CBWD3-206ENST00000478048 BABAM1Q9NWV8 329 aa14.91□□□□□ -0.02
CBWD3-206ENST00000478048 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-206ENST00000478048 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
CBWD3-206ENST00000478048 ITPK1Q13572 414 aa14.9□□□□□ -0.02
CBWD3-206ENST00000478048 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
CBWD3-206ENST00000478048 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
CBWD3-206ENST00000478048 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
CBWD3-206ENST00000478048 HEG1Q9ULI3 1381 aa14.89□□□□□ -0.03
CBWD3-206ENST00000478048 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
CBWD3-206ENST00000478048 TJP1Q07157 1748 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms