RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 ICE2Q659A1 982 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 FIBPO43427 364 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 F13A1P00488 732 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
ABCF1-205ENST00000475993 UPF3BQ9BZI7 483 aaKnown RBP12.55□□□□□ -0.4
ABCF1-205ENST00000475993 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
ABCF1-205ENST00000475993 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 APBB1O00213 710 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 STX6O43752 255 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
ABCF1-205ENST00000475993 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
ABCF1-205ENST00000475993 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 GLI2P10070 1586 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 SYT1P21579 422 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
ABCF1-205ENST00000475993 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 FANCAO15360 1455 aa12.54□□□□□ -0.4
ABCF1-205ENST00000475993 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ZNF446Q9NWS9 450 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 MRVI1Q9Y6F6 885 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ERBB3P21860 1342 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ZNF75DP51815 510 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 LUZP1Q86V48 1076 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 ASXL2Q76L83 1435 aa12.53□□□□□ -0.4
ABCF1-205ENST00000475993 C10orf67Q8IYJ2 551 aa12.52□□□□□ -0.4
ABCF1-205ENST00000475993 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.4
ABCF1-205ENST00000475993 ANO2Q9NQ90 1003 aa12.52□□□□□ -0.4
ABCF1-205ENST00000475993 ADGRB3O60242 1522 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 SALL3Q9BXA9 1300 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 IRF6O14896 467 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 CHMLP26374 656 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 FBLN2P98095 1184 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 ELF2Q15723 593 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 FYB1O15117 783 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
ABCF1-205ENST00000475993 TYRO3Q06418 890 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
ABCF1-205ENST00000475993 STK26Q9P289 416 aa12.52□□□□□ -0.41
ABCF1-205ENST00000475993 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 SLC26A8Q96RN1 970 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 BMS1Q14692 1282 aaKnown RBP12.51□□□□□ -0.41
ABCF1-205ENST00000475993 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 CBX8Q9HC52 389 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABCF1-205ENST00000475993 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
ABCF1-205ENST00000475993 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
ABCF1-205ENST00000475993 TRIM66O15016 1216 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-205ENST00000475993 GUCY2CP25092 1073 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
ABCF1-205ENST00000475993 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-205ENST00000475993 MSH6P52701 1360 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 HSPA4P34932 840 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
ABCF1-205ENST00000475993 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
ABCF1-205ENST00000475993 TRIM5Q9C035 493 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 PPLO60437 1756 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 RAD50Q92878 1312 aa12.5□□□□□ -0.41
ABCF1-205ENST00000475993 GOLIM4O00461 696 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 CDC25BP30305 580 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 SATB1Q01826 763 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 DNAJC21Q5F1R6 531 aaKnown RBP12.49□□□□□ -0.41
ABCF1-205ENST00000475993 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 TTC14Q96N46 770 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
ABCF1-205ENST00000475993 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 PTPN14Q15678 1187 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 MEIS3Q99687 375 aa12.49□□□□□ -0.41
ABCF1-205ENST00000475993 MROH1Q8NDA8 1641 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 EFCAB6Q5THR3 1501 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 HMMRO75330 724 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 SLU7O95391 586 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms