RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 FLT4P35916 1363 aa7.62□□□□□ -1.19
PSMD6-204ENST00000467853 OVOS2A0A0J9YW53 1432 aa7.62□□□□□ -1.19
PSMD6-204ENST00000467853 OVOS2Q6IE36 1432 aa7.62□□□□□ -1.19
PSMD6-204ENST00000467853 KIF1BPQ96EK5 621 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 SBNO1A3KN83 1393 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 KRT24Q2M2I5 525 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 NOLC1Q14978 699 aaKnown RBP eCLIP7.61□□□□□ -1.19
PSMD6-204ENST00000467853 NOL8Q76FK4 1167 aaKnown RBP7.61□□□□□ -1.19
PSMD6-204ENST00000467853 RAD50Q92878 1312 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 F6X3S4 739 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 STX6O43752 255 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 AMPHP49418 695 aa7.61□□□□□ -1.19
PSMD6-204ENST00000467853 CACNA1FO60840 1977 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 GNAT3A8MTJ3 354 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 HIP1O00291 1037 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 CCDC94Q9BW85 323 aaPredicted RBP7.6□□□□□ -1.19
PSMD6-204ENST00000467853 USP25Q9UHP3 1055 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 ACEP12821 1306 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 ADCY5O95622 1261 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 G2E3Q7L622 706 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 SSH3Q8TE77 659 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
PSMD6-204ENST00000467853 USP6P35125 1406 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 METP08581 1390 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 TTC41PQ6P2S7 1318 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 KDM4AO75164 1064 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 F13A1P00488 732 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 CCDC192P0DO97 292 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 PDCP20941 246 aa7.6□□□□□ -1.19
PSMD6-204ENST00000467853 MTHFSDQ2M296 383 aaKnown RBP7.6□□□□□ -1.19
PSMD6-204ENST00000467853 RGPD1P0DJD0 1748 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 ERC1Q8IUD2 1116 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 PALD1Q9ULE6 856 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 KIF3AQ9Y496 699 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 SGSM2O43147 1006 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 SURF6O75683 361 aaKnown RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 GLRX3O76003 335 aaKnown RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 UPF3BQ9BZI7 483 aaKnown RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 TM6SF1Q9BZW5 370 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 KDRP35968 1356 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 PSMA5P28066 241 aa7.59□□□□□ -1.19
PSMD6-204ENST00000467853 GTF2F1P35269 517 aaKnown RBP eCLIP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 TAF7Q15545 349 aaPredicted RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 RPAP1Q9BWH6 1393 aaPredicted RBP7.59□□□□□ -1.19
PSMD6-204ENST00000467853 MAP3K5Q99683 1374 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 NALCNQ8IZF0 1738 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 OS9Q13438 667 aaPredicted RBP7.58□□□□□ -1.2
PSMD6-204ENST00000467853 ANKRD1Q15327 319 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 VPS53Q5VIR6 699 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 SPTLC3Q9NUV7 552 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 IGSF1Q8N6C5 1336 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 NRXN3Q9Y4C0 1643 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 HOXB7P09629 217 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 MAP3K19Q56UN5 1328 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 PNMA6EA0A0J9YXQ4 647 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 GOLGA6L4A6NEF3 574 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 GADD45BO75293 160 aaPredicted RBP7.58□□□□□ -1.2
PSMD6-204ENST00000467853 PDRG1Q9NUG6 133 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 PRR36Q9H6K5 1346 aa7.58□□□□□ -1.2
PSMD6-204ENST00000467853 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 CNPY2Q9Y2B0 182 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 N4BP2Q86UW6 1770 aaPredicted RBP7.57□□□□□ -1.2
PSMD6-204ENST00000467853 PTPRUQ92729 1446 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 CAVIN2O95810 425 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 SYT1P21579 422 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 AK2P54819 239 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 KRT85P78386 507 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 CLASRPQ8N2M8 674 aaKnown RBP7.57□□□□□ -1.2
PSMD6-204ENST00000467853 TUBGCP6Q96RT7 1819 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 TTC14Q96N46 770 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 USP42Q9H9J4 1324 aaKnown RBP7.57□□□□□ -1.2
PSMD6-204ENST00000467853 TOPAZ1Q8N9V7 1692 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 PLCB2Q00722 1185 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 TSHZ3Q63HK5 1081 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 PPP1R42Q7Z4L9 355 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 LSG1Q9H089 658 aaKnown RBP7.57□□□□□ -1.2
PSMD6-204ENST00000467853 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
PSMD6-204ENST00000467853 FMN2Q9NZ56 1722 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 SPDYE4A6NLX3 237 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 FIBPO43427 364 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 HCLS1P14317 486 aaPredicted RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 KCNJ4P48050 445 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 FOXD4L6Q3SYB3 417 aaPredicted RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 UTP14CQ5TAP6 766 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 FOXD4L3Q6VB84 417 aaPredicted RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 NUTM1Q86Y26 1132 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 USP44Q9H0E7 712 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 GDPD2Q9HCC8 539 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 IL1RAPL2Q9NP60 686 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 TNRQ92752 1358 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 SRGAP3O43295 1099 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms