RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 MYL6BP14649 208 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
NUP188-204ENST00000467044 MRPL50Q8N5N7 158 aaKnown RBP13.76□□□□□ -0.21
NUP188-204ENST00000467044 DBF4Q9UBU7 674 aaPredicted RBP13.76□□□□□ -0.21
NUP188-204ENST00000467044 EP400Q96L91 3159 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
NUP188-204ENST00000467044 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
NUP188-204ENST00000467044 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
NUP188-204ENST00000467044 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
NUP188-204ENST00000467044 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
NUP188-204ENST00000467044 TJP1Q07157 1748 aa13.75□□□□□ -0.21
NUP188-204ENST00000467044 BAG6P46379 1132 aa13.74□□□□□ -0.21
NUP188-204ENST00000467044 EN1Q05925 392 aaPredicted RBP13.74□□□□□ -0.21
NUP188-204ENST00000467044 SLC27A3Q5K4L6 730 aa13.74□□□□□ -0.21
NUP188-204ENST00000467044 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
NUP188-204ENST00000467044 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
NUP188-204ENST00000467044 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
NUP188-204ENST00000467044 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
NUP188-204ENST00000467044 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
NUP188-204ENST00000467044 PDIA6Q15084 440 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 PROSER3Q2NL68 480 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 G2E3Q7L622 706 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
NUP188-204ENST00000467044 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
NUP188-204ENST00000467044 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
NUP188-204ENST00000467044 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 PLIN1O60240 522 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
NUP188-204ENST00000467044 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
NUP188-204ENST00000467044 NBPF14Q5TI25 921 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 NBPF10Q6P3W6 841 aaKnown RBP13.72□□□□□ -0.21
NUP188-204ENST00000467044 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
NUP188-204ENST00000467044 PROM2Q8N271 834 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 ARXQ96QS3 562 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 PHAXQ9H814 394 aaKnown RBP13.72□□□□□ -0.21
NUP188-204ENST00000467044 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
NUP188-204ENST00000467044 KIF16BQ96L93 1317 aa13.71□□□□□ -0.21
NUP188-204ENST00000467044 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
NUP188-204ENST00000467044 RRP1P56182 461 aaKnown RBP13.71□□□□□ -0.21
NUP188-204ENST00000467044 INTS5Q6P9B9 1019 aaKnown RBP13.71□□□□□ -0.21
NUP188-204ENST00000467044 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
NUP188-204ENST00000467044 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.22
NUP188-204ENST00000467044 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.22
NUP188-204ENST00000467044 COL5A3P25940 1745 aaPredicted RBP13.7□□□□□ -0.22
NUP188-204ENST00000467044 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
NUP188-204ENST00000467044 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
NUP188-204ENST00000467044 FLIIQ13045 1269 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
NUP188-204ENST00000467044 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 AK7Q96M32 723 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
NUP188-204ENST00000467044 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
NUP188-204ENST00000467044 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
NUP188-204ENST00000467044 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
NUP188-204ENST00000467044 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
NUP188-204ENST00000467044 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
NUP188-204ENST00000467044 PTPRCP08575 1304 aa13.68□□□□□ -0.22
NUP188-204ENST00000467044 GNPATO15228 680 aa13.68□□□□□ -0.22
NUP188-204ENST00000467044 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
NUP188-204ENST00000467044 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
NUP188-204ENST00000467044 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
NUP188-204ENST00000467044 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
NUP188-204ENST00000467044 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
NUP188-204ENST00000467044 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
NUP188-204ENST00000467044 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 SMIM5Q71RC9 77 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
NUP188-204ENST00000467044 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
NUP188-204ENST00000467044 PI4KAP2A4QPH2 592 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 F6X3S4 739 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 MS4A1P11836 297 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 TRIM27P14373 513 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
NUP188-204ENST00000467044 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
NUP188-204ENST00000467044 PI4KAP1Q8N8J0 262 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
NUP188-204ENST00000467044 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 A0A087WZG4 1122 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 PHF14O94880 888 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
NUP188-204ENST00000467044 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
NUP188-204ENST00000467044 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms