RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CYP46A1Q9Y6A2 500 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 IGSF1Q8N6C5 1336 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 NUCB1Q02818 461 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
RBM39-223ENST00000463004 CHPF2Q9P2E5 772 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 QRICH2Q9H0J4 1663 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 XBP1P17861 261 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 SIL1Q9H173 461 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 METTL24Q5JXM2 366 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
RBM39-223ENST00000463004 CDC5LQ99459 802 aaKnown RBP14.09□□□□□ -0.15
RBM39-223ENST00000463004 TRMT112Q9UI30 125 aaKnown RBP14.09□□□□□ -0.15
RBM39-223ENST00000463004 GRM8O00222 908 aa14.08□□□□□ -0.15
RBM39-223ENST00000463004 NEK4P51957 841 aa14.08□□□□□ -0.15
RBM39-223ENST00000463004 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.15
RBM39-223ENST00000463004 PREX1Q8TCU6 1659 aa14.08□□□□□ -0.15
RBM39-223ENST00000463004 ZBTB40Q9NUA8 1239 aa14.08□□□□□ -0.16
RBM39-223ENST00000463004 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.16
RBM39-223ENST00000463004 CDC42BPGQ6DT37 1551 aa14.08□□□□□ -0.16
RBM39-223ENST00000463004 PLCB2Q00722 1185 aa14.08□□□□□ -0.16
RBM39-223ENST00000463004 EVI5LQ96CN4 794 aa14.08□□□□□ -0.16
RBM39-223ENST00000463004 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
RBM39-223ENST00000463004 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
RBM39-223ENST00000463004 TRMT2AQ8IZ69 625 aaKnown RBP14.07□□□□□ -0.16
RBM39-223ENST00000463004 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 IL1RAPL2Q9NP60 686 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 TECPR2O15040 1411 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 DIP2AQ14689 1571 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 XAGE3Q8WTP9 111 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 SMC5Q8IY18 1101 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 SLC5A1P13866 664 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 ZNF790Q6PG37 636 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
RBM39-223ENST00000463004 K7ELQ4 463 aaPredicted RBP14.06□□□□□ -0.16
RBM39-223ENST00000463004 COPS6Q7L5N1 327 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 HOOK1Q9UJC3 728 aaKnown RBP14.06□□□□□ -0.16
RBM39-223ENST00000463004 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 TTF1Q15361 905 aaPredicted RBP14.06□□□□□ -0.16
RBM39-223ENST00000463004 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
RBM39-223ENST00000463004 CAVIN4Q5BKX8 364 aa14.05□□□□□ -0.16
RBM39-223ENST00000463004 BRMS1Q9HCU9 246 aa14.05□□□□□ -0.16
RBM39-223ENST00000463004 BTG4Q9NY30 223 aa14.05□□□□□ -0.16
RBM39-223ENST00000463004 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
RBM39-223ENST00000463004 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
RBM39-223ENST00000463004 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
RBM39-223ENST00000463004 MBD3O95983 291 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 TSPYL6Q8N831 410 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 UQCRFS1P1P0C7P4 283 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 MEIS3Q99687 375 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 PTPRMP28827 1452 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
RBM39-223ENST00000463004 IL15P40933 162 aaPredicted RBP14.04□□□□□ -0.16
RBM39-223ENST00000463004 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 RHPN1Q8TCX5 695 aa14.04□□□□□ -0.16
RBM39-223ENST00000463004 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
RBM39-223ENST00000463004 AK7Q96M32 723 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 PCDHB15Q9Y5E8 787 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 TTC41PQ6P2S7 1318 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 ZBTB3Q9H5J0 574 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
RBM39-223ENST00000463004 DEKP35659 375 aaKnown RBP14.02□□□□□ -0.16
RBM39-223ENST00000463004 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 PLBD2Q8NHP8 589 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 NCAPD2Q15021 1401 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 CDKL5O76039 1030 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 ZFYP08048 801 aaPredicted RBP14.02□□□□□ -0.16
RBM39-223ENST00000463004 MAP3K12Q12852 859 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 MCTP1Q6DN14 999 aa14.02□□□□□ -0.16
RBM39-223ENST00000463004 IQGAP1P46940 1657 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 IGHDP01880 384 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
RBM39-223ENST00000463004 DNTTIP2Q5QJE6 756 aaKnown RBP14.02□□□□□ -0.17
RBM39-223ENST00000463004 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 RASSF8Q8NHQ8 419 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 ZNF287Q9HBT7 754 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
RBM39-223ENST00000463004 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.17
RBM39-223ENST00000463004 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 DRC7Q8IY82 874 aa14.02□□□□□ -0.17
RBM39-223ENST00000463004 ZBTB7BO15156 539 aaPredicted RBP14.01□□□□□ -0.17
RBM39-223ENST00000463004 LETM1O95202 739 aaPredicted RBP14.01□□□□□ -0.17
RBM39-223ENST00000463004 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms