RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 SOS1Q07889 1333 aaPredicted RBP16.34■□□□□ 0.21
SMTN-213ENST00000460658 INSRP06213 1382 aa16.34■□□□□ 0.21
SMTN-213ENST00000460658 PIK3C2GO75747 1445 aa16.33■□□□□ 0.21
SMTN-213ENST00000460658 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.21
SMTN-213ENST00000460658 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.21
SMTN-213ENST00000460658 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.21
SMTN-213ENST00000460658 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
SMTN-213ENST00000460658 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
SMTN-213ENST00000460658 CGNQ9P2M7 1197 aaKnown RBP16.33■□□□□ 0.2
SMTN-213ENST00000460658 UBE2HP62256 183 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 MAP3K12Q12852 859 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 TAF4BQ92750 862 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
SMTN-213ENST00000460658 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 TUBB4AP04350 444 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 RAB34Q9BZG1 259 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 FANCAO15360 1455 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 PPP1R12BO60237 982 aaPredicted RBP16.32■□□□□ 0.2
SMTN-213ENST00000460658 KANK3Q6NY19 840 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
SMTN-213ENST00000460658 EIF5P55010 431 aaKnown RBP16.32■□□□□ 0.2
SMTN-213ENST00000460658 PRAG1Q86YV5 1406 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
SMTN-213ENST00000460658 STX1AQ16623 288 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 KDM5BQ9UGL1 1544 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 NME9Q86XW9 330 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 STX6O43752 255 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 KIF5CO60282 957 aa16.31■□□□□ 0.2
SMTN-213ENST00000460658 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
SMTN-213ENST00000460658 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
SMTN-213ENST00000460658 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
SMTN-213ENST00000460658 BAG4O95429 457 aaKnown RBP16.3■□□□□ 0.2
SMTN-213ENST00000460658 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 SSFA2P28290 1259 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
SMTN-213ENST00000460658 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 NAPBQ9H115 298 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
SMTN-213ENST00000460658 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
SMTN-213ENST00000460658 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
SMTN-213ENST00000460658 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
SMTN-213ENST00000460658 SPA17Q15506 151 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 CTCFLQ8NI51 663 aaPredicted RBP16.29■□□□□ 0.2
SMTN-213ENST00000460658 SLC5A1P13866 664 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 TSG101Q99816 390 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 ZNF213O14771 459 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 IDI1Q13907 227 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 PDCL3Q9H2J4 239 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 PLCH2O75038 1416 aa16.29■□□□□ 0.2
SMTN-213ENST00000460658 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 DESP17661 470 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
SMTN-213ENST00000460658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■■ 149.1
SMTN-213ENST00000460658 BMP15O95972 392 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 CETN2P41208 172 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 VPS36Q86VN1 386 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
SMTN-213ENST00000460658 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 MYD88Q99836 296 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 MBIPQ9NS73 344 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 ZFYVE9O95405 1425 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 UHRF1BP1Q6BDS2 1440 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 FAM107BQ9H098 131 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 SEC63Q9UGP8 760 aaKnown RBP16.27■□□□□ 0.2
SMTN-213ENST00000460658 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 ZFYP08048 801 aaPredicted RBP16.27■□□□□ 0.2
SMTN-213ENST00000460658 CRACR2AQ9BSW2 395 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
SMTN-213ENST00000460658 KDM4AO75164 1064 aa16.27■□□□□ 0.19
SMTN-213ENST00000460658 HS1BP3Q53T59 392 aa16.27■□□□□ 0.19
SMTN-213ENST00000460658 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
SMTN-213ENST00000460658 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
SMTN-213ENST00000460658 PAXBP1Q9Y5B6 917 aa16.26■□□□□ 0.19
SMTN-213ENST00000460658 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
SMTN-213ENST00000460658 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
SMTN-213ENST00000460658 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
SMTN-213ENST00000460658 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
SMTN-213ENST00000460658 ANKRD18BA2A2Z9 1011 aa16.25■□□□□ 0.19
SMTN-213ENST00000460658 USO1O60763 962 aaKnown RBP16.25■□□□□ 0.19
SMTN-213ENST00000460658 CASQ1P31415 396 aa16.25■□□□□ 0.19
SMTN-213ENST00000460658 LRSAM1Q6UWE0 723 aa16.25■□□□□ 0.19
SMTN-213ENST00000460658 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
SMTN-213ENST00000460658 A0A087WZG4 1122 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms