RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MED1Q15648 1581 aaPredicted RBP6.13□□□□□ -1.43
RBM39-220ENST00000455343 KIF14Q15058 1648 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 GPR37L1O60883 481 aa6.12□□□□□ -1.43
RBM39-220ENST00000455343 PTGIRP43119 386 aa6.12□□□□□ -1.43
RBM39-220ENST00000455343 PIP4K2BP78356 416 aa6.12□□□□□ -1.43
RBM39-220ENST00000455343 FOXD4L5Q5VV16 416 aaPredicted RBP6.12□□□□□ -1.43
RBM39-220ENST00000455343 GPR161Q8N6U8 529 aaKnown RBP6.12□□□□□ -1.43
RBM39-220ENST00000455343 CYLDQ9NQC7 956 aa6.12□□□□□ -1.43
RBM39-220ENST00000455343 ARHGAP35Q9NRY4 1499 aa6.12□□□□□ -1.43
RBM39-220ENST00000455343 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
RBM39-220ENST00000455343 SPAG9O60271 1321 aaKnown RBP6.11□□□□□ -1.43
RBM39-220ENST00000455343 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
RBM39-220ENST00000455343 KRT76Q01546 638 aa6.11□□□□□ -1.43
RBM39-220ENST00000455343 MTMR14Q8NCE2 650 aa6.11□□□□□ -1.43
RBM39-220ENST00000455343 BANK1Q8NDB2 785 aa6.11□□□□□ -1.43
RBM39-220ENST00000455343 NANOS1Q8WY41 292 aaKnown RBP6.11□□□□□ -1.43
RBM39-220ENST00000455343 MYO5CQ9NQX4 1742 aa6.11□□□□□ -1.43
RBM39-220ENST00000455343 CPS1P31327 1500 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 SHANK2Q9UPX8 1470 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 KIAA1107Q9UPP5 1409 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 NR1H3Q13133 447 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 GGT6Q6P531 493 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 TRIM52Q96A61 297 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 KIDINS220Q9ULH0 1771 aa6.1□□□□□ -1.43
RBM39-220ENST00000455343 CEP170BQ9Y4F5 1589 aaPredicted RBP6.1□□□□□ -1.43
RBM39-220ENST00000455343 A2ML1A8K2U0 1454 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 SENP3-EIF4A1A0A087X0R7 540 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 ITGA6P23229 1130 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 HNRNPMP52272 730 aaKnown RBP eCLIP6.09□□□□□ -1.43
RBM39-220ENST00000455343 NDUFB9Q9Y6M9 179 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 MROH2AA6NES4 1674 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 ALKQ9UM73 1620 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 SAMD9LQ8IVG5 1584 aa6.09□□□□□ -1.43
RBM39-220ENST00000455343 A2MP01023 1474 aa6.09□□□□□ -1.44
RBM39-220ENST00000455343 UBTFP17480 764 aaKnown RBP6.08□□□□□ -1.44
RBM39-220ENST00000455343 TPRNQ4KMQ1 711 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 CCDC125Q86Z20 511 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 CNTNAP3BQ96NU0 1288 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
RBM39-220ENST00000455343 CNTNAP3Q9BZ76 1288 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 SNRKQ9NRH2 765 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 PLXNC1O60486 1568 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 GPATCH8Q9UKJ3 1502 aaKnown RBP6.08□□□□□ -1.44
RBM39-220ENST00000455343 CDC42BPBQ9Y5S2 1711 aa6.08□□□□□ -1.44
RBM39-220ENST00000455343 ZNF142P52746 1687 aaPredicted RBP6.07□□□□□ -1.44
RBM39-220ENST00000455343 MYO3AQ8NEV4 1616 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 CDC14CA4D256 554 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 ATP5J2-PTCD1G3V325 749 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 APBB1O00213 710 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
RBM39-220ENST00000455343 ERVK-9P63128 1117 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 RNFT1Q5M7Z0 435 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 RNF20Q5VTR2 975 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 CC2D2BQ6DHV5 1058 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 LYSMD3Q7Z3D4 306 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 ZNF592Q92610 1267 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 ZNF777Q9ULD5 760 aaPredicted RBP6.07□□□□□ -1.44
RBM39-220ENST00000455343 MED14O60244 1454 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 CASKIN1Q8WXD9 1431 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 DNMT1P26358 1616 aaKnown RBP6.07□□□□□ -1.44
RBM39-220ENST00000455343 PREX2Q70Z35 1606 aa6.07□□□□□ -1.44
RBM39-220ENST00000455343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.06□□□□□ -1.44
RBM39-220ENST00000455343 NEURL4Q96JN8 1562 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 RNF144AP50876 292 aaPredicted RBP6.06□□□□□ -1.44
RBM39-220ENST00000455343 SV2AQ7L0J3 742 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 THEMISQ8N1K5 641 aaPredicted RBP6.06□□□□□ -1.44
RBM39-220ENST00000455343 VWA5B2Q8N398 1253 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 ZNF330Q9Y3S2 320 aaPredicted RBP6.06□□□□□ -1.44
RBM39-220ENST00000455343 CCDC18Q5T9S5 1454 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 ITSN2Q9NZM3 1697 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 MIA2Q96PC5 1412 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 VWDEQ8N2E2 1590 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 DHX29Q7Z478 1369 aaKnown RBP6.06□□□□□ -1.44
RBM39-220ENST00000455343 TNRQ92752 1358 aa6.06□□□□□ -1.44
RBM39-220ENST00000455343 ATP7AQ04656 1500 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 SYCP2Q9BX26 1530 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 PLEKHH2Q8IVE3 1493 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 MBD5Q9P267 1494 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 GPC1P35052 558 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 SCTRP47872 440 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 CFDP1Q9UEE9 299 aaPredicted RBP6.05□□□□□ -1.44
RBM39-220ENST00000455343 PCDHB11Q9Y5F2 797 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 RTEL1-TNFRSF6BF6WH68 1400 aa6.05□□□□□ -1.44
RBM39-220ENST00000455343 NPHP4O75161 1426 aaPredicted RBP6.05□□□□□ -1.44
RBM39-220ENST00000455343 SRCAPQ6ZRS2 3230 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 LRRC7Q96NW7 1537 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 PZPP20742 1482 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 A0A1W2PRU2 124 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 RHOQP17081 205 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 POTEAQ6S8J7 498 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 PRICKLE2Q7Z3G6 844 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 CYP2U1Q7Z449 544 aa6.04□□□□□ -1.44
RBM39-220ENST00000455343 NLRP1Q9C000 1473 aa6.03□□□□□ -1.44
RBM39-220ENST00000455343 INO80Q9ULG1 1556 aaPredicted RBP6.03□□□□□ -1.44
RBM39-220ENST00000455343 MEN1O00255 615 aa6.03□□□□□ -1.44
RBM39-220ENST00000455343 KIF3BO15066 747 aa6.03□□□□□ -1.44
RBM39-220ENST00000455343 TRAK2O60296 914 aa6.03□□□□□ -1.44
RBM39-220ENST00000455343 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
RBM39-220ENST00000455343 CUEDC1Q9NWM3 386 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms