RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 GNAT3A8MTJ3 354 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 CTAGE5O15320 804 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 IFIT1P09914 478 aaKnown RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 PTPN14Q15678 1187 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 ATF7IPQ6VMQ6 1270 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 RPAP2Q8IXW5 612 aaPredicted RBP7.15□□□□□ -1.26
PCDH15-219ENST00000448885 NCOA2Q15596 1464 aa7.15□□□□□ -1.26
PCDH15-219ENST00000448885 AMPD3Q01432 767 aa7.15□□□□□ -1.27
PCDH15-219ENST00000448885 CCDC12Q8WUD4 166 aaPredicted RBP7.15□□□□□ -1.27
PCDH15-219ENST00000448885 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.27
PCDH15-219ENST00000448885 BCCIPQ9P287 314 aaKnown RBP eCLIP7.15□□□□□ -1.27
PCDH15-219ENST00000448885 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.27
PCDH15-219ENST00000448885 TTC21AQ8NDW8 1320 aa7.15□□□□□ -1.27
PCDH15-219ENST00000448885 SYNJ2O15056 1496 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 PAFAH1B1P43034 410 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 CFAP57Q96MR6 1250 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 SLC12A7Q9Y666 1083 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 RNF187Q5TA31 235 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 TICAM2Q86XR7 235 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 RNF41Q9H4P4 317 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 SH2B1Q9NRF2 756 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 POGZQ7Z3K3 1410 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 CHMP4BP1P59074 171 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 NUTM1Q86Y26 1132 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 ZNF444Q8N0Y2 327 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 ANKIB1Q9P2G1 1089 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 POLA1P09884 1462 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 TTLL12Q14166 644 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 CALML4Q96GE6 196 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 POLR3GO15318 223 aaPredicted RBP7.14□□□□□ -1.27
PCDH15-219ENST00000448885 NEMFO60524 1076 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 SPECC1LQ69YQ0 1117 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 LRRC9Q6ZRR7 1453 aa7.14□□□□□ -1.27
PCDH15-219ENST00000448885 CASKIN1Q8WXD9 1431 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 LMAN1P49257 510 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 MRPS9P82933 396 aaKnown RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 MAP3K12Q12852 859 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 KIF4BQ2VIQ3 1234 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 TMOD3Q9NYL9 352 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CLIP2Q9UDT6 1046 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 RPGRIP1LQ68CZ1 1315 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CCDC175P0C221 793 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 BRPF3Q9ULD4 1205 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 DAPK1P53355 1430 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 NLRP5P59047 1200 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 RPGRQ92834 1020 aaKnown RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 PKNOX2Q96KN3 472 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 TTC12Q9H892 705 aaPredicted RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CCDC194A0A1B0GVG4 234 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 GOLGA8AA7E2F4 631 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 GOLGA8BA8MQT2 603 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 MX1P20591 662 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 TDRD12Q587J7 1177 aaKnown RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 KIF18AQ8NI77 898 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 KIF1BPQ96EK5 621 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 NAPBQ9H115 298 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 FGD5Q6ZNL6 1462 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 FSD2A1L4K1 749 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 PRPF40BQ6NWY9 871 aaKnown RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CATIPQ7Z7H3 387 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 KCNH5Q8NCM2 988 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CDCA7LQ96GN5 454 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 SCAND2PQ9GZW5 306 aaPredicted RBP7.13□□□□□ -1.27
PCDH15-219ENST00000448885 CABP1Q9NZU7 370 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 LIG1P18858 919 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 C8orf76Q96K31 380 aa7.13□□□□□ -1.27
PCDH15-219ENST00000448885 MINDY4BA8MYZ0 360 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CFAP70Q5T0N1 1121 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 ABCF2Q9UG63 623 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 SYCE3A1L190 88 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 GOLGA6L9A6NEM1 432 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CCDC172P0C7W6 258 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CCDC40Q4G0X9 1142 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 GSDMDP57764 484 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 IQCA1Q86XH1 822 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 GLRX3O76003 335 aaKnown RBP7.12□□□□□ -1.27
PCDH15-219ENST00000448885 FCHSD2O94868 740 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 KLHL10Q6JEL2 608 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 ANKLE2Q86XL3 938 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 EHBP1Q8NDI1 1231 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 RRP9O43818 475 aaKnown RBP7.12□□□□□ -1.27
PCDH15-219ENST00000448885 MTIF2P46199 727 aaKnown RBP7.12□□□□□ -1.27
PCDH15-219ENST00000448885 TTF1Q15361 905 aaPredicted RBP7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CEP112Q8N8E3 955 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 CNNM3Q8NE01 707 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 MYD88Q99836 296 aa7.12□□□□□ -1.27
PCDH15-219ENST00000448885 MACROD2A1Z1Q3 448 aa7.11□□□□□ -1.27
PCDH15-219ENST00000448885 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
PCDH15-219ENST00000448885 STX1AQ16623 288 aa7.11□□□□□ -1.27
PCDH15-219ENST00000448885 IL1RAPL2Q9NP60 686 aa7.11□□□□□ -1.27
PCDH15-219ENST00000448885 PRDM11Q9NQV5 511 aa7.11□□□□□ -1.27
PCDH15-219ENST00000448885 IKBKGQ9Y6K9 419 aa7.11□□□□□ -1.27
PCDH15-219ENST00000448885 URI1O94763 535 aaPredicted RBP7.11□□□□□ -1.27
PCDH15-219ENST00000448885 NFE2L2Q16236 605 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms