RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 LRRCC1Q9C099 1032 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 GNAI2P04899 355 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 HOXC9P31274 260 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 TMEM87AQ8NBN3 555 aa18.03■□□□□ 0.48
TOP3B-206ENST00000436282 DNTTIP2Q5QJE6 756 aaKnown RBP18.02■□□□□ 0.48
TOP3B-206ENST00000436282 GDPD2Q9HCC8 539 aa18.02■□□□□ 0.48
TOP3B-206ENST00000436282 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.47
TOP3B-206ENST00000436282 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-206ENST00000436282 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-206ENST00000436282 RIMS1Q86UR5 1692 aaKnown RBP18.01■□□□□ 0.47
TOP3B-206ENST00000436282 TCHHQ07283 1943 aa18.01■□□□□ 0.47
TOP3B-206ENST00000436282 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
TOP3B-206ENST00000436282 CCDC183Q5T5S1 534 aa18.01■□□□□ 0.47
TOP3B-206ENST00000436282 EPB41L2O43491 1005 aaKnown RBP18.01■□□□□ 0.47
TOP3B-206ENST00000436282 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
TOP3B-206ENST00000436282 TRIM6-TRIM34B2RNG4 842 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 FOXD4L6Q3SYB3 417 aaPredicted RBP18■□□□□ 0.47
TOP3B-206ENST00000436282 FOXD4L3Q6VB84 417 aaPredicted RBP18■□□□□ 0.47
TOP3B-206ENST00000436282 RILPL2Q969X0 211 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 UPF3BQ9BZI7 483 aaKnown RBP18■□□□□ 0.47
TOP3B-206ENST00000436282 STAP2Q9UGK3 403 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 USP25Q9UHP3 1055 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 KDRP35968 1356 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
TOP3B-206ENST00000436282 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
TOP3B-206ENST00000436282 LETM1O95202 739 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-206ENST00000436282 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
TOP3B-206ENST00000436282 ARID3AQ99856 593 aa17.99■□□□□ 0.47
TOP3B-206ENST00000436282 SRCIN1Q9C0H9 1055 aa17.99■□□□□ 0.47
TOP3B-206ENST00000436282 RPAP1Q9BWH6 1393 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-206ENST00000436282 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-206ENST00000436282 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
TOP3B-206ENST00000436282 ADCY5O95622 1261 aa17.98■□□□□ 0.47
TOP3B-206ENST00000436282 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
TOP3B-206ENST00000436282 AOX1Q06278 1338 aa17.97■□□□□ 0.47
TOP3B-206ENST00000436282 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
TOP3B-206ENST00000436282 ZNF830Q96NB3 372 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-206ENST00000436282 GNAI3P08754 354 aa17.97■□□□□ 0.47
TOP3B-206ENST00000436282 HSPA4P34932 840 aa17.97■□□□□ 0.47
TOP3B-206ENST00000436282 SPTLC3Q9NUV7 552 aa17.97■□□□□ 0.47
TOP3B-206ENST00000436282 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
TOP3B-206ENST00000436282 ATP8B2P98198 1209 aa17.96■□□□□ 0.47
TOP3B-206ENST00000436282 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
TOP3B-206ENST00000436282 TTC12Q9H892 705 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-206ENST00000436282 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 UBE2HP62256 183 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 FLIIQ13045 1269 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 ESCO1Q5FWF5 840 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 MPNDQ8N594 471 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 CNPY2Q9Y2B0 182 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
TOP3B-206ENST00000436282 ANKLE2Q86XL3 938 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 ZNF710Q8N1W2 664 aa17.95■□□□□ 0.46
TOP3B-206ENST00000436282 ZSCAN22P10073 491 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-206ENST00000436282 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
TOP3B-206ENST00000436282 XRN1Q8IZH2 1706 aaKnown RBP17.94■□□□□ 0.46
TOP3B-206ENST00000436282 PSME1Q06323 249 aa17.94■□□□□ 0.46
TOP3B-206ENST00000436282 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
TOP3B-206ENST00000436282 KDM4AO75164 1064 aa17.93■□□□□ 0.46
TOP3B-206ENST00000436282 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
TOP3B-206ENST00000436282 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
TOP3B-206ENST00000436282 TAF7Q15545 349 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-206ENST00000436282 IL25Q9H293 177 aa17.93■□□□□ 0.46
TOP3B-206ENST00000436282 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-206ENST00000436282 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
TOP3B-206ENST00000436282 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-206ENST00000436282 KIF3AQ9Y496 699 aa17.92■□□□□ 0.46
TOP3B-206ENST00000436282 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
TOP3B-206ENST00000436282 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
TOP3B-206ENST00000436282 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
TOP3B-206ENST00000436282 C17orf53Q8N3J3 647 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-206ENST00000436282 RAD50Q92878 1312 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 STX6O43752 255 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
TOP3B-206ENST00000436282 TSC1Q92574 1164 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 TTC14Q96N46 770 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 FUCA2Q9BTY2 467 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 PRDM10Q9NQV6 1147 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 ATP6V1DQ9Y5K8 247 aa17.91■□□□□ 0.46
TOP3B-206ENST00000436282 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
TOP3B-206ENST00000436282 F13A1P00488 732 aa17.9■□□□□ 0.46
TOP3B-206ENST00000436282 DMTNQ08495 405 aa17.9■□□□□ 0.46
TOP3B-206ENST00000436282 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
TOP3B-206ENST00000436282 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
TOP3B-206ENST00000436282 SYT1P21579 422 aa17.89■□□□□ 0.46
TOP3B-206ENST00000436282 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.46
TOP3B-206ENST00000436282 SNX14Q9Y5W7 946 aa17.89■□□□□ 0.46
TOP3B-206ENST00000436282 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.46
TOP3B-206ENST00000436282 LRRC59Q96AG4 307 aaKnown RBP17.89■□□□□ 0.45
TOP3B-206ENST00000436282 TPM3P06753 285 aa17.89■□□□□ 0.45
TOP3B-206ENST00000436282 AK2P54819 239 aa17.89■□□□□ 0.45
TOP3B-206ENST00000436282 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
TOP3B-206ENST00000436282 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
TOP3B-206ENST00000436282 SGSM2O43147 1006 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms