RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
PTCH1-208ENST00000430669 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
PTCH1-208ENST00000430669 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
PTCH1-208ENST00000430669 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
PTCH1-208ENST00000430669 IP6K1Q92551 441 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-208ENST00000430669 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
PTCH1-208ENST00000430669 WASF1Q92558 559 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 TXLNAP40222 546 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
PTCH1-208ENST00000430669 KRT85P78386 507 aa13.69□□□□□ -0.22
PTCH1-208ENST00000430669 A0A087WZG4 1122 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTCH1-208ENST00000430669 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-208ENST00000430669 MYD88Q99836 296 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 ZPR1O75312 459 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-208ENST00000430669 TSPY26PQ9H489 355 aa13.68□□□□□ -0.22
PTCH1-208ENST00000430669 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 EXOC5O00471 708 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 HOXB7P09629 217 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
PTCH1-208ENST00000430669 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
PTCH1-208ENST00000430669 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
PTCH1-208ENST00000430669 METTL24Q5JXM2 366 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 CCDC70Q6NSX1 233 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
PTCH1-208ENST00000430669 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-208ENST00000430669 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-208ENST00000430669 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-208ENST00000430669 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 SLC5A1P13866 664 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
PTCH1-208ENST00000430669 JAKMIP1Q96N16 626 aaKnown RBP13.65□□□□□ -0.22
PTCH1-208ENST00000430669 MED14O60244 1454 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 HOXC9P31274 260 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 CAVIN4Q5BKX8 364 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 USP32Q8NFA0 1604 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 CCDC192P0DO97 292 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 IL13P35225 146 aa13.65□□□□□ -0.22
PTCH1-208ENST00000430669 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-208ENST00000430669 CAVIN1Q6NZI2 390 aaKnown RBP13.65□□□□□ -0.22
PTCH1-208ENST00000430669 KCNA6P17658 529 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 PES1O00541 588 aaKnown RBP13.64□□□□□ -0.23
PTCH1-208ENST00000430669 CCP110O43303 1012 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
PTCH1-208ENST00000430669 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 SDF4Q9BRK5 362 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
PTCH1-208ENST00000430669 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 ANAPC15P60006 121 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
PTCH1-208ENST00000430669 NEXMIFQ5QGS0 1516 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 F6X3S4 739 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-208ENST00000430669 GRM8O00222 908 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
PTCH1-208ENST00000430669 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 MAP3K19Q56UN5 1328 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 TTC41PQ6P2S7 1318 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 TDO2P48775 406 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 DIP2AQ14689 1571 aa13.63□□□□□ -0.23
PTCH1-208ENST00000430669 VAMP4O75379 141 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
PTCH1-208ENST00000430669 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
PTCH1-208ENST00000430669 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms