RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 CALM1P0DP23 149 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 CALM2P0DP24 149 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 CALM3P0DP25 149 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 FSD1Q9BTV5 496 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 BAG6P46379 1132 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.81□□□□□ -1.484e-7■■□□□ 14.3
TTC3-204ENST00000399017 FKBP4Q02790 459 aaKnown RBP eCLIP5.81□□□□□ -1.48
TTC3-204ENST00000399017 NUP133Q8WUM0 1156 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 NECTIN2Q92692 538 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 CCDC39Q9UFE4 941 aa5.81□□□□□ -1.48
TTC3-204ENST00000399017 PABPC4Q13310 644 aaKnown RBP eCLIP5.8□□□□□ -1.48
TTC3-204ENST00000399017 STK11IPQ8N1F8 1099 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 HMOX1P09601 288 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 NLRP5P59047 1200 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 MAPK8IP2Q13387 824 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 CERS3Q8IU89 383 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 ANKRD30BQ9BXX2 1392 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 UTP14CQ5TAP6 766 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 ZC3H12CQ9C0D7 883 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 NOP58Q9Y2X3 529 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 LARP1Q6PKG0 1096 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 MAP3K7O43318 606 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 SLC5A1P13866 664 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 EYA3Q99504 573 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 CCDC77Q9BR77 488 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 IKBKGQ9Y6K9 419 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 TDRD9Q8NDG6 1382 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 CNTLNQ9NXG0 1405 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 GNAI2P04899 355 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 CCT4P50991 539 aaKnown RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 PLS1Q14651 629 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 TTF1Q15361 905 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 CTCFLQ8NI51 663 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 ARID4AP29374 1257 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 ARL1P40616 181 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 TRIM6Q9C030 488 aaPredicted RBP5.8□□□□□ -1.48
TTC3-204ENST00000399017 FAM135AQ9P2D6 1515 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 CCDC96Q2M329 555 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 SYCP3Q8IZU3 236 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 CEP63Q96MT8 703 aa5.8□□□□□ -1.48
TTC3-204ENST00000399017 MCM3P25205 808 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 U3KPZ7 1027 aaPredicted RBP5.79□□□□□ -1.48
TTC3-204ENST00000399017 CFAP36Q96G28 342 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 TCHPQ9BT92 498 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 GSE1Q14687 1217 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 SSBP05455 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
TTC3-204ENST00000399017 TSPYL2Q9H2G4 693 aaPredicted RBP5.79□□□□□ -1.48
TTC3-204ENST00000399017 IFIT5Q13325 482 aaKnown RBP5.79□□□□□ -1.48
TTC3-204ENST00000399017 PSMD1Q99460 953 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 RAD50Q92878 1312 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 ITSN2Q9NZM3 1697 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 STK32BQ9NY57 414 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 HECW1Q76N89 1606 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 ECM2O94769 699 aaPredicted RBP5.79□□□□□ -1.48
TTC3-204ENST00000399017 RUNDC1Q96C34 613 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 DDX49Q9Y6V7 483 aaKnown RBP5.79□□□□□ -1.48
TTC3-204ENST00000399017 KIF14Q15058 1648 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 XRCC6P12956 609 aaKnown RBP eCLIP5.79□□□□□ -1.48
TTC3-204ENST00000399017 MYL6BP14649 208 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 PLCG2P16885 1265 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 CFAP58Q5T655 872 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 C1orf228Q6PIY5 440 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 TSPYL1Q9H0U9 437 aa5.79□□□□□ -1.48
TTC3-204ENST00000399017 MYOM3Q5VTT5 1437 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 BICDL1Q6ZP65 573 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 SUPT20HQ8NEM7 779 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 BICD1Q96G01 975 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 ANKRD12Q6UB98 2062 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 METTL24Q5JXM2 366 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 FKBP15Q5T1M5 1219 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 FLAD1Q8NFF5 587 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 LRRFIP2Q9Y608 721 aaKnown RBP5.78□□□□□ -1.48
TTC3-204ENST00000399017 SMARCA4P51532 1647 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 VPS37CA5D8V6 355 aaPredicted RBP5.78□□□□□ -1.48
TTC3-204ENST00000399017 H7C1D1 291 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 DKC1O60832 514 aaKnown RBP eCLIP5.78□□□□□ -1.481e-6■■■■■ 30
TTC3-204ENST00000399017 DYDC1Q8WWB3 177 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 CALML4Q96GE6 196 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 NAPBQ9H115 298 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 MKRN1Q9UHC7 482 aaKnown RBP5.78□□□□□ -1.48
TTC3-204ENST00000399017 RTCBQ9Y3I0 505 aaKnown RBP5.78□□□□□ -1.48
TTC3-204ENST00000399017 GSTTP1A0A1W2PQM5 241 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 GIPC1O14908 333 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 GMNNO75496 209 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 HDGFL1Q5TGJ6 251 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 CCER2I3L3R5 266 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 CBFA2T2O43439 604 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
TTC3-204ENST00000399017 ZNF449Q6P9G9 518 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 CATIPQ7Z7H3 387 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 TXNDC16Q9P2K2 825 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 KCNG1Q9UIX4 513 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 HAUS7Q99871 368 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 TFCP2L1Q9NZI6 479 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 KIF11P52732 1056 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 KIF4BQ2VIQ3 1234 aa5.78□□□□□ -1.48
TTC3-204ENST00000399017 PPP2R3CQ969Q6 453 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms