RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 SYT1P21579 422 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 CBX1P83916 185 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 BLOC1S2Q6QNY1 142 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.345e-6■■□□□ 14
TNFRSF1B-201ENST00000376259 AK9Q5TCS8 1911 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 SASS6Q6UVJ0 657 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
TNFRSF1B-201ENST00000376259 IGSF3O75054 1194 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 ATP5J2-PTCD1G3V325 749 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 OFD1O75665 1012 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
TNFRSF1B-201ENST00000376259 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 IL17REQ8NFR9 667 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 ZNF445P59923 1031 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 CCDC183Q5T5S1 534 aa17.15■□□□□ 0.34
TNFRSF1B-201ENST00000376259 ZSCAN22P10073 491 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 KRT85P78386 507 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 SPATA32Q96LK8 384 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 LAMC1P11047 1609 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
TNFRSF1B-201ENST00000376259 LTKP29376 864 aa17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 FAM227BQ96M60 508 aa17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-201ENST00000376259 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 IL25Q9H293 177 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 CEP152O94986 1710 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 QRICH2Q9H0J4 1663 aa17.12■□□□□ 0.33
TNFRSF1B-201ENST00000376259 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 MYD88Q99836 296 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 BRD1O95696 1058 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 GLI2P10070 1586 aa17.11■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PTH1RQ03431 593 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 APPP05067 770 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 TPD52L1Q16890 204 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ZBTB9Q96C00 473 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
TNFRSF1B-201ENST00000376259 F13A1P00488 732 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 LARGE1O95461 756 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 PSMA5P28066 241 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
TNFRSF1B-201ENST00000376259 SHROOM2Q13796 1616 aa17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 KCNA6P17658 529 aa17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ATP2B1P20020 1258 aa17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 ISM2Q6H9L7 571 aa17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 TRMT1Q9NXH9 659 aaKnown RBP17.08■□□□□ 0.33
TNFRSF1B-201ENST00000376259 HOXC9P31274 260 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 SNRKQ9NRH2 765 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ME1P48163 572 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 UBE2HP62256 183 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
TNFRSF1B-201ENST00000376259 DDIT3P35638 169 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms