RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
PMF1-201ENST00000368273 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
PMF1-201ENST00000368273 PHF14O94880 888 aa17.14■□□□□ 0.33
PMF1-201ENST00000368273 CRKLP46109 303 aaKnown RBP17.14■□□□□ 0.33
PMF1-201ENST00000368273 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
PMF1-201ENST00000368273 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
PMF1-201ENST00000368273 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
PMF1-201ENST00000368273 SGIP1Q9BQI5 828 aa17.14■□□□□ 0.33
PMF1-201ENST00000368273 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
PMF1-201ENST00000368273 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
PMF1-201ENST00000368273 NEFLP07196 543 aa17.13■□□□□ 0.33
PMF1-201ENST00000368273 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
PMF1-201ENST00000368273 PPP1R1BQ9UD71 204 aaPredicted RBP17.13■□□□□ 0.33
PMF1-201ENST00000368273 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
PMF1-201ENST00000368273 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
PMF1-201ENST00000368273 KCNQ3O43525 872 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
PMF1-201ENST00000368273 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
PMF1-201ENST00000368273 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
PMF1-201ENST00000368273 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
PMF1-201ENST00000368273 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
PMF1-201ENST00000368273 ADRA2BP18089 450 aa17.1■□□□□ 0.33
PMF1-201ENST00000368273 TRAPPC3LQ5T215 181 aa17.1■□□□□ 0.33
PMF1-201ENST00000368273 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
PMF1-201ENST00000368273 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
PMF1-201ENST00000368273 POLD1P28340 1107 aa17.09■□□□□ 0.33
PMF1-201ENST00000368273 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
PMF1-201ENST00000368273 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
PMF1-201ENST00000368273 STARD3NLO95772 234 aa17.08■□□□□ 0.32
PMF1-201ENST00000368273 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
PMF1-201ENST00000368273 ARXQ96QS3 562 aa17.08■□□□□ 0.32
PMF1-201ENST00000368273 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
PMF1-201ENST00000368273 FANCIQ9NVI1 1328 aa17.06■□□□□ 0.32
PMF1-201ENST00000368273 RFC4P35249 363 aa17.06■□□□□ 0.32
PMF1-201ENST00000368273 FKBP8Q14318 412 aa17.06■□□□□ 0.32
PMF1-201ENST00000368273 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
PMF1-201ENST00000368273 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
PMF1-201ENST00000368273 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
PMF1-201ENST00000368273 ZNF853P0CG23 659 aa17.05■□□□□ 0.32
PMF1-201ENST00000368273 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
PMF1-201ENST00000368273 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
PMF1-201ENST00000368273 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
PMF1-201ENST00000368273 GNAI1P63096 354 aa17.04■□□□□ 0.32
PMF1-201ENST00000368273 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
PMF1-201ENST00000368273 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
PMF1-201ENST00000368273 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
PMF1-201ENST00000368273 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
PMF1-201ENST00000368273 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
PMF1-201ENST00000368273 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
PMF1-201ENST00000368273 FHDC1Q9C0D6 1143 aaPredicted RBP17.03■□□□□ 0.32
PMF1-201ENST00000368273 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
PMF1-201ENST00000368273 GYS1P13807 737 aa17.02■□□□□ 0.32
PMF1-201ENST00000368273 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
PMF1-201ENST00000368273 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
PMF1-201ENST00000368273 SYT17Q9BSW7 474 aa17.02■□□□□ 0.32
PMF1-201ENST00000368273 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
PMF1-201ENST00000368273 COL15A1P39059 1388 aa17.02■□□□□ 0.31
PMF1-201ENST00000368273 USP42Q9H9J4 1324 aaKnown RBP17.01■□□□□ 0.31
PMF1-201ENST00000368273 A1BGP04217 495 aa17.01■□□□□ 0.31
PMF1-201ENST00000368273 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
PMF1-201ENST00000368273 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
PMF1-201ENST00000368273 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
PMF1-201ENST00000368273 CHL1O00533 1208 aa17■□□□□ 0.31
PMF1-201ENST00000368273 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
PMF1-201ENST00000368273 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
PMF1-201ENST00000368273 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
PMF1-201ENST00000368273 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
PMF1-201ENST00000368273 A0A087WZG4 1122 aa16.99■□□□□ 0.31
PMF1-201ENST00000368273 ZPR1O75312 459 aa16.99■□□□□ 0.31
PMF1-201ENST00000368273 MMP10P09238 476 aa16.99■□□□□ 0.31
PMF1-201ENST00000368273 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
PMF1-201ENST00000368273 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
PMF1-201ENST00000368273 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
PMF1-201ENST00000368273 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
PMF1-201ENST00000368273 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
PMF1-201ENST00000368273 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
PMF1-201ENST00000368273 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
PMF1-201ENST00000368273 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
PMF1-201ENST00000368273 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
PMF1-201ENST00000368273 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
PMF1-201ENST00000368273 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
PMF1-201ENST00000368273 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
PMF1-201ENST00000368273 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
PMF1-201ENST00000368273 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
PMF1-201ENST00000368273 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
PMF1-201ENST00000368273 CD2APQ9Y5K6 639 aa16.95■□□□□ 0.3
PMF1-201ENST00000368273 BCAR3O75815 825 aa16.94■□□□□ 0.3
PMF1-201ENST00000368273 TM4SF1P30408 202 aa16.94■□□□□ 0.3
PMF1-201ENST00000368273 TBC1D2BQ9UPU7 963 aa16.94■□□□□ 0.3
PMF1-201ENST00000368273 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
PMF1-201ENST00000368273 PLIN1O60240 522 aa16.93■□□□□ 0.3
PMF1-201ENST00000368273 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
PMF1-201ENST00000368273 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
PMF1-201ENST00000368273 DDR1Q08345 913 aa16.92■□□□□ 0.3
PMF1-201ENST00000368273 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
PMF1-201ENST00000368273 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 993.2 ms