RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 DUOX2Q9NRD8 1548 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 SHPRHQ149N8 1683 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 SLC19A1P41440 591 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 HNRNPMP52272 730 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 SLFNL1Q499Z3 407 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 PLEKHM2Q8IWE5 1019 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 ADAMTS19Q8TE59 1207 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 FOXJ1Q92949 421 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 CARD14Q9BXL6 1004 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 MROH1Q8NDA8 1641 aa4.93□□□□□ -1.62
RNU1-140P-201ENST00000365040 ARHGAP31Q2M1Z3 1444 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 ERBINQ96RT1 1412 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 KIF3BO15066 747 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 ATP9BO43861 1147 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 DHX9Q08211 1270 aaKnown RBP4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 SPRYD7Q5W111 196 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 ZNF598Q86UK7 904 aaKnown RBP4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 RNF135Q8IUD6 432 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 SIRT1Q96EB6 747 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 CDK15Q96Q40 435 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 PPP1R12CQ9BZL4 782 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 PIK3C2BO00750 1634 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 NCOA2Q15596 1464 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 EFCAB6Q5THR3 1501 aa4.92□□□□□ -1.62
RNU1-140P-201ENST00000365040 DIP2AQ14689 1571 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 FGD6Q6ZV73 1430 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 ESPNB1AK53 854 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 TSPY4P0CV99 314 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 TSPY10P0CW01 314 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 SKOR1P84550 965 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 PDE4CQ08493 712 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 C4orf48Q5BLP8 95 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 RC3H1Q5TC82 1133 aaKnown RBP4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 HOMEZQ8IX15 550 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 PBXIP1Q96AQ6 731 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 UCN2Q96RP3 112 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 CEP126Q9P2H0 1117 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 CHIC2Q9UKJ5 165 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 EID1Q9Y6B2 187 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 CDK12Q9NYV4 1490 aaPredicted RBP4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 ADGRB3O60242 1522 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 MAP3K1Q13233 1512 aa4.91□□□□□ -1.62
RNU1-140P-201ENST00000365040 COL16A1Q07092 1604 aaPredicted RBP4.9□□□□□ -1.62
RNU1-140P-201ENST00000365040 NCOA3Q9Y6Q9 1424 aa4.9□□□□□ -1.62
RNU1-140P-201ENST00000365040 PALM3A6NDB9 673 aaPredicted RBP4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 NR5A1Q13285 461 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 ZNF697Q5TEC3 545 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 LIAT1Q6ZQX7 453 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 MAFBQ9Y5Q3 323 aaPredicted RBP4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 CHD2O14647 1828 aaKnown RBP4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 MSH6P52701 1360 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 KANK1Q14678 1352 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 AHDC1Q5TGY3 1603 aaPredicted RBP4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 PTPN23Q9H3S7 1636 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 JCADQ9P266 1359 aa4.9□□□□□ -1.63
RNU1-140P-201ENST00000365040 RPRD2Q5VT52 1461 aaKnown RBP4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 LMTK2Q8IWU2 1503 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP17L5A8MUK1 530 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 ATP5J2-PTCD1G3V325 749 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 ADH1CP00326 375 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRR20EP86478 221 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRR20CP86479 221 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRR20DP86480 221 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRR20BP86481 221 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRR20AP86496 221 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 EML3Q32P44 896 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 CFAP70Q5T0N1 1121 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 VASH1Q7L8A9 365 aaPredicted RBP4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PLPP7Q8NBV4 271 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 KCTD15Q96SI1 283 aaPredicted RBP4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 PRKD2Q9BZL6 878 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 DOLKQ9UPQ8 538 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 SPATA31A6Q5VVP1 1343 aa4.89□□□□□ -1.63
RNU1-140P-201ENST00000365040 CFAP65Q6ZU64 1925 aaKnown RBP4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP17L3A6NCW0 530 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP17L4A6NCW7 530 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 SKIP12755 728 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 FSHRP23945 695 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 ATP1A2P50993 1020 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 ZNF772Q68DY9 489 aaPredicted RBP4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP17L2Q6R6M4 530 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 USP17L1Q7RTZ2 530 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 TRIM50Q86XT4 487 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 PHTF2Q8N3S3 785 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 EMID1Q96A84 441 aaPredicted RBP4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 USTQ9Y2C2 406 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 TET3O43151 1660 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 GCC2Q8IWJ2 1684 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 TMEM2Q9UHN6 1383 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 DCCP43146 1447 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 MYOM3Q5VTT5 1437 aa4.88□□□□□ -1.63
RNU1-140P-201ENST00000365040 FAM196BA6NMK8 535 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 SIAH2O43255 324 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 ELOAQ14241 798 aaKnown RBP4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 INTS6LQ5JSJ4 861 aaKnown RBP4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 TBC1D9Q6ZT07 1266 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 CCDC116Q8IYX3 515 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 MRGPRX2Q96LB1 330 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 ARID3AQ99856 593 aa4.87□□□□□ -1.63
RNU1-140P-201ENST00000365040 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms