RNA–Protein interactions for RNA: ENST00000356521.8

CBWD1-202, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-202ENST00000356521 RTCBQ9Y3I0 505 aaKnown RBP22.84■■□□□ 1.25
CBWD1-202ENST00000356521 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
CBWD1-202ENST00000356521 COL23A1Q86Y22 540 aaPredicted RBP22.83■■□□□ 1.25
CBWD1-202ENST00000356521 MBIPQ9NS73 344 aa22.83■■□□□ 1.25
CBWD1-202ENST00000356521 IFT57Q9NWB7 429 aa22.83■■□□□ 1.25
CBWD1-202ENST00000356521 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
CBWD1-202ENST00000356521 ZBTB1Q9Y2K1 713 aa22.82■■□□□ 1.24
CBWD1-202ENST00000356521 SSFA2P28290 1259 aa22.82■■□□□ 1.24
CBWD1-202ENST00000356521 USP16Q9Y5T5 823 aa22.82■■□□□ 1.24
CBWD1-202ENST00000356521 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
CBWD1-202ENST00000356521 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
CBWD1-202ENST00000356521 GNAI1P63096 354 aa22.81■■□□□ 1.24
CBWD1-202ENST00000356521 RPS6KA4O75676 772 aa22.8■■□□□ 1.24
CBWD1-202ENST00000356521 KRT24Q2M2I5 525 aa22.8■■□□□ 1.24
CBWD1-202ENST00000356521 LAMB4A4D0S4 1761 aa22.8■■□□□ 1.24
CBWD1-202ENST00000356521 ZNF853P0CG23 659 aa22.79■■□□□ 1.24
CBWD1-202ENST00000356521 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
CBWD1-202ENST00000356521 FLAD1Q8NFF5 587 aa22.79■■□□□ 1.24
CBWD1-202ENST00000356521 ZNF330Q9Y3S2 320 aaPredicted RBP22.79■■□□□ 1.24
CBWD1-202ENST00000356521 A1BGP04217 495 aa22.79■■□□□ 1.24
CBWD1-202ENST00000356521 PIP4K2AP48426 406 aaPredicted RBP22.79■■□□□ 1.24
CBWD1-202ENST00000356521 TSR2Q969E8 191 aaKnown RBP22.79■■□□□ 1.24
CBWD1-202ENST00000356521 TRAPPC3LQ5T215 181 aa22.78■■□□□ 1.24
CBWD1-202ENST00000356521 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
CBWD1-202ENST00000356521 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
CBWD1-202ENST00000356521 MSL1Q68DK7 614 aa22.77■■□□□ 1.23
CBWD1-202ENST00000356521 NGEFQ8N5V2 710 aa22.77■■□□□ 1.23
CBWD1-202ENST00000356521 ARHGEF1Q92888 912 aaKnown RBP22.77■■□□□ 1.23
CBWD1-202ENST00000356521 C4AP0C0L4 1744 aa22.76■■□□□ 1.23
CBWD1-202ENST00000356521 ADRA2BP18089 450 aa22.76■■□□□ 1.23
CBWD1-202ENST00000356521 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
CBWD1-202ENST00000356521 COL15A1P39059 1388 aa22.75■■□□□ 1.23
CBWD1-202ENST00000356521 RFC4P35249 363 aa22.75■■□□□ 1.23
CBWD1-202ENST00000356521 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
CBWD1-202ENST00000356521 IL16Q14005 1332 aa22.75■■□□□ 1.23
CBWD1-202ENST00000356521 SPON1Q9HCB6 807 aa22.74■■□□□ 1.23
CBWD1-202ENST00000356521 EIF2S2P20042 333 aaKnown RBP22.74■■□□□ 1.23
CBWD1-202ENST00000356521 SLC16A10Q8TF71 515 aa22.74■■□□□ 1.23
CBWD1-202ENST00000356521 NECTIN2Q92692 538 aa22.74■■□□□ 1.23
CBWD1-202ENST00000356521 ZNF521Q96K83 1311 aa22.72■■□□□ 1.23
CBWD1-202ENST00000356521 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
CBWD1-202ENST00000356521 SPINK5Q9NQ38 1064 aaPredicted RBP22.72■■□□□ 1.23
CBWD1-202ENST00000356521 SRP68Q9UHB9 627 aaKnown RBP22.72■■□□□ 1.23
CBWD1-202ENST00000356521 FANCIQ9NVI1 1328 aa22.72■■□□□ 1.23
CBWD1-202ENST00000356521 NBPF26B4DH59 902 aa22.71■■□□□ 1.23
CBWD1-202ENST00000356521 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
CBWD1-202ENST00000356521 NBPF10Q6P3W6 841 aaKnown RBP22.71■■□□□ 1.23
CBWD1-202ENST00000356521 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
CBWD1-202ENST00000356521 NBPF15Q8N660 670 aa22.71■■□□□ 1.23
CBWD1-202ENST00000356521 ARXQ96QS3 562 aa22.71■■□□□ 1.23
CBWD1-202ENST00000356521 LRP5O75197 1615 aa22.71■■□□□ 1.23
CBWD1-202ENST00000356521 IL6STP40189 918 aaPredicted RBP22.71■■□□□ 1.23
CBWD1-202ENST00000356521 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
CBWD1-202ENST00000356521 C8orf58Q8NAV2 365 aa22.7■■□□□ 1.22
CBWD1-202ENST00000356521 MYL6BP14649 208 aa22.69■■□□□ 1.22
CBWD1-202ENST00000356521 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
CBWD1-202ENST00000356521 ZPR1O75312 459 aa22.68■■□□□ 1.22
CBWD1-202ENST00000356521 PTGER2P43116 358 aa22.68■■□□□ 1.22
CBWD1-202ENST00000356521 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
CBWD1-202ENST00000356521 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
CBWD1-202ENST00000356521 MYH16Q9H6N6 1097 aa22.68■■□□□ 1.22
CBWD1-202ENST00000356521 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
CBWD1-202ENST00000356521 HOXB7P09629 217 aa22.67■■□□□ 1.22
CBWD1-202ENST00000356521 USPL1Q5W0Q7 1092 aa22.67■■□□□ 1.22
CBWD1-202ENST00000356521 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
CBWD1-202ENST00000356521 A0A087WZG4 1122 aa22.66■■□□□ 1.22
CBWD1-202ENST00000356521 ANXA1P04083 346 aa22.66■■□□□ 1.22
CBWD1-202ENST00000356521 GYS1P13807 737 aa22.66■■□□□ 1.22
CBWD1-202ENST00000356521 POLD1P28340 1107 aa22.66■■□□□ 1.22
CBWD1-202ENST00000356521 GOLGA2Q08379 1002 aa22.66■■□□□ 1.22
CBWD1-202ENST00000356521 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
CBWD1-202ENST00000356521 PROSER3Q2NL68 480 aa22.65■■□□□ 1.22
CBWD1-202ENST00000356521 SGIP1Q9BQI5 828 aa22.65■■□□□ 1.22
CBWD1-202ENST00000356521 NARFQ9UHQ1 456 aa22.65■■□□□ 1.22
CBWD1-202ENST00000356521 DZIP3Q86Y13 1208 aaKnown RBP22.65■■□□□ 1.22
CBWD1-202ENST00000356521 CHPF2Q9P2E5 772 aa22.65■■□□□ 1.22
CBWD1-202ENST00000356521 SCN7AQ01118 1682 aa22.64■■□□□ 1.21
CBWD1-202ENST00000356521 FKBP8Q14318 412 aa22.64■■□□□ 1.21
CBWD1-202ENST00000356521 ERBB4Q15303 1308 aa22.64■■□□□ 1.21
CBWD1-202ENST00000356521 PDIA6Q15084 440 aa22.63■■□□□ 1.21
CBWD1-202ENST00000356521 COL24A1Q17RW2 1714 aa22.63■■□□□ 1.21
CBWD1-202ENST00000356521 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
CBWD1-202ENST00000356521 TWISTNBQ3B726 338 aaPredicted RBP22.62■■□□□ 1.21
CBWD1-202ENST00000356521 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
CBWD1-202ENST00000356521 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
CBWD1-202ENST00000356521 MMP10P09238 476 aa22.62■■□□□ 1.21
CBWD1-202ENST00000356521 E9PSI1 815 aa22.61■■□□□ 1.21
CBWD1-202ENST00000356521 CAMTA2O94983 1202 aa22.6■■□□□ 1.21
CBWD1-202ENST00000356521 BCL2L12Q9HB09 334 aa22.6■■□□□ 1.21
CBWD1-202ENST00000356521 BCORQ6W2J9 1755 aa22.6■■□□□ 1.21
CBWD1-202ENST00000356521 KLHL34Q8N239 644 aa22.6■■□□□ 1.21
CBWD1-202ENST00000356521 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
CBWD1-202ENST00000356521 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
CBWD1-202ENST00000356521 TCERG1O14776 1098 aaKnown RBP22.59■■□□□ 1.21
CBWD1-202ENST00000356521 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
CBWD1-202ENST00000356521 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
CBWD1-202ENST00000356521 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
CBWD1-202ENST00000356521 AIMP1Q12904 312 aaKnown RBP22.58■■□□□ 1.21
CBWD1-202ENST00000356521 KIF6Q6ZMV9 814 aa22.58■■□□□ 1.21
CBWD1-202ENST00000356521 BICDL1Q6ZP65 573 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms