RNA–Protein interactions for RNA: ENST00000356521.8

CBWD1-202, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-202ENST00000356521 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
CBWD1-202ENST00000356521 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.56
CBWD1-202ENST00000356521 ABCC9O60706 1549 aa36.39■■■■□ 3.42
CBWD1-202ENST00000356521 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
CBWD1-202ENST00000356521 ZCCHC6Q5VYS8 1495 aaKnown RBP35.13■■■■□ 3.21
CBWD1-202ENST00000356521 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
CBWD1-202ENST00000356521 NACADO15069 1562 aa35.02■■■■□ 3.2
CBWD1-202ENST00000356521 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
CBWD1-202ENST00000356521 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
CBWD1-202ENST00000356521 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.08
CBWD1-202ENST00000356521 SCRIBQ14160 1630 aa34.18■■■■□ 3.06
CBWD1-202ENST00000356521 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
CBWD1-202ENST00000356521 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
CBWD1-202ENST00000356521 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
CBWD1-202ENST00000356521 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
CBWD1-202ENST00000356521 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
CBWD1-202ENST00000356521 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
CBWD1-202ENST00000356521 CECR2Q9BXF3 1484 aa32.81■■■□□ 2.84
CBWD1-202ENST00000356521 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
CBWD1-202ENST00000356521 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
CBWD1-202ENST00000356521 MROH2BQ7Z745 1585 aa32.49■■■□□ 2.79
CBWD1-202ENST00000356521 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
CBWD1-202ENST00000356521 SMARCA2P51531 1590 aa32.36■■■□□ 2.77
CBWD1-202ENST00000356521 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
CBWD1-202ENST00000356521 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
CBWD1-202ENST00000356521 HMGXB3Q12766 1538 aa32.19■■■□□ 2.74
CBWD1-202ENST00000356521 BAZ1BQ9UIG0 1483 aaKnown RBP32.18■■■□□ 2.74
CBWD1-202ENST00000356521 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
CBWD1-202ENST00000356521 WIZO95785 1651 aa32.17■■■□□ 2.74
CBWD1-202ENST00000356521 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
CBWD1-202ENST00000356521 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
CBWD1-202ENST00000356521 NESP48681 1621 aa31.55■■■□□ 2.64
CBWD1-202ENST00000356521 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
CBWD1-202ENST00000356521 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
CBWD1-202ENST00000356521 CADPSQ9ULU8 1353 aa31.4■■■□□ 2.62
CBWD1-202ENST00000356521 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
CBWD1-202ENST00000356521 CFTRP13569 1480 aa31.26■■■□□ 2.6
CBWD1-202ENST00000356521 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
CBWD1-202ENST00000356521 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
CBWD1-202ENST00000356521 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
CBWD1-202ENST00000356521 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
CBWD1-202ENST00000356521 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
CBWD1-202ENST00000356521 THOC2Q8NI27 1593 aaKnown RBP30.99■■■□□ 2.55
CBWD1-202ENST00000356521 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
CBWD1-202ENST00000356521 CUX2O14529 1486 aa30.85■■■□□ 2.53
CBWD1-202ENST00000356521 WDR62O43379 1518 aa30.8■■■□□ 2.52
CBWD1-202ENST00000356521 URB2Q14146 1524 aaKnown RBP30.76■■■□□ 2.51
CBWD1-202ENST00000356521 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
CBWD1-202ENST00000356521 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
CBWD1-202ENST00000356521 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
CBWD1-202ENST00000356521 CUX1P39880 1505 aa30.47■■■□□ 2.47
CBWD1-202ENST00000356521 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
CBWD1-202ENST00000356521 WRNQ14191 1432 aaPredicted RBP eCLIP30.35■■■□□ 2.45
CBWD1-202ENST00000356521 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
CBWD1-202ENST00000356521 IFT140Q96RY7 1462 aa30.33■■■□□ 2.45
CBWD1-202ENST00000356521 SYNJ1O43426 1573 aa30.29■■■□□ 2.44
CBWD1-202ENST00000356521 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
CBWD1-202ENST00000356521 TOP2BQ02880 1626 aa30.24■■■□□ 2.43
CBWD1-202ENST00000356521 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
CBWD1-202ENST00000356521 BIVM-ERCC5R4GMW8 1640 aa30.23■■■□□ 2.43
CBWD1-202ENST00000356521 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
CBWD1-202ENST00000356521 SOGA1O94964 1423 aa30.22■■■□□ 2.43
CBWD1-202ENST00000356521 EIF4G3O43432 1585 aaKnown RBP30.13■■■□□ 2.41
CBWD1-202ENST00000356521 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.41
CBWD1-202ENST00000356521 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
CBWD1-202ENST00000356521 WDR97A6NE52 1622 aa30.05■■■□□ 2.4
CBWD1-202ENST00000356521 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.4
CBWD1-202ENST00000356521 ABCA5Q8WWZ7 1642 aa29.9■■■□□ 2.38
CBWD1-202ENST00000356521 GAPVD1Q14C86 1478 aa29.89■■■□□ 2.38
CBWD1-202ENST00000356521 GRIN2BQ13224 1484 aa29.84■■■□□ 2.37
CBWD1-202ENST00000356521 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
CBWD1-202ENST00000356521 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
CBWD1-202ENST00000356521 TRIM41Q8WV44 630 aa29.81■■■□□ 2.36
CBWD1-202ENST00000356521 MAGI1Q96QZ7 1491 aaPredicted RBP29.73■■■□□ 2.35
CBWD1-202ENST00000356521 FBLN2P98095 1184 aa29.71■■■□□ 2.35
CBWD1-202ENST00000356521 CHD1O14646 1710 aa29.69■■■□□ 2.34
CBWD1-202ENST00000356521 KIF27Q86VH2 1401 aa29.69■■■□□ 2.34
CBWD1-202ENST00000356521 ERICH3Q5RHP9 1530 aa29.65■■■□□ 2.34
CBWD1-202ENST00000356521 SYNJ2O15056 1496 aa29.63■■■□□ 2.33
CBWD1-202ENST00000356521 OSCARQ8IYS5 282 aa29.62■■■□□ 2.33
CBWD1-202ENST00000356521 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
CBWD1-202ENST00000356521 CHMP7Q8WUX9 453 aaPredicted RBP29.62■■■□□ 2.33
CBWD1-202ENST00000356521 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
CBWD1-202ENST00000356521 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
CBWD1-202ENST00000356521 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
CBWD1-202ENST00000356521 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
CBWD1-202ENST00000356521 IGF1RP08069 1367 aa29.51■■■□□ 2.31
CBWD1-202ENST00000356521 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
CBWD1-202ENST00000356521 CUL7Q14999 1698 aa29.45■■■□□ 2.3
CBWD1-202ENST00000356521 CARMIL1Q5VZK9 1371 aa29.36■■■□□ 2.29
CBWD1-202ENST00000356521 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
CBWD1-202ENST00000356521 CLASP1Q7Z460 1538 aa29.33■■■□□ 2.29
CBWD1-202ENST00000356521 NUP160Q12769 1436 aa29.3■■■□□ 2.28
CBWD1-202ENST00000356521 FAM9AQ8IZU1 332 aaPredicted RBP29.25■■■□□ 2.27
CBWD1-202ENST00000356521 EEA1Q15075 1411 aa29.22■■■□□ 2.27
CBWD1-202ENST00000356521 RAPGEF2Q9Y4G8 1499 aa29.22■■■□□ 2.27
CBWD1-202ENST00000356521 ARHGEF11O15085 1522 aa29.19■■■□□ 2.26
CBWD1-202ENST00000356521 CSRNP3Q8WYN3 585 aa29.18■■■□□ 2.26
CBWD1-202ENST00000356521 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
CBWD1-202ENST00000356521 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms