RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 CNTNAP4Q9C0A0 1308 aa19.81■□□□□ 0.76
HNF4A-202ENST00000316673 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
HNF4A-202ENST00000316673 TJP1Q07157 1748 aa19.81■□□□□ 0.76
HNF4A-202ENST00000316673 RNF123Q5XPI4 1314 aa19.8■□□□□ 0.76
HNF4A-202ENST00000316673 ZNF428Q96B54 188 aa19.8■□□□□ 0.76
HNF4A-202ENST00000316673 COL5A3P25940 1745 aaPredicted RBP19.8■□□□□ 0.76
HNF4A-202ENST00000316673 NUP188Q5SRE5 1749 aa19.8■□□□□ 0.76
HNF4A-202ENST00000316673 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
HNF4A-202ENST00000316673 KCNQ4P56696 695 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 STK32BQ9NY57 414 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 C4BP0C0L5 1744 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 FKBP8Q14318 412 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 AK7Q96M32 723 aa19.79■□□□□ 0.76
HNF4A-202ENST00000316673 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
HNF4A-202ENST00000316673 CRKLP46109 303 aaKnown RBP19.78■□□□□ 0.76
HNF4A-202ENST00000316673 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
HNF4A-202ENST00000316673 USP16Q9Y5T5 823 aa19.78■□□□□ 0.76
HNF4A-202ENST00000316673 RRP1P56182 461 aaKnown RBP19.77■□□□□ 0.76
HNF4A-202ENST00000316673 TWISTNBQ3B726 338 aaPredicted RBP19.77■□□□□ 0.76
HNF4A-202ENST00000316673 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
HNF4A-202ENST00000316673 SLC15A2Q16348 729 aa19.76■□□□□ 0.75
HNF4A-202ENST00000316673 C8orf58Q8NAV2 365 aa19.76■□□□□ 0.75
HNF4A-202ENST00000316673 FLAD1Q8NFF5 587 aa19.76■□□□□ 0.75
HNF4A-202ENST00000316673 AKT1S1Q96B36 256 aa19.76■□□□□ 0.75
HNF4A-202ENST00000316673 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
HNF4A-202ENST00000316673 HDGFL1Q5TGJ6 251 aa19.75■□□□□ 0.75
HNF4A-202ENST00000316673 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
HNF4A-202ENST00000316673 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
HNF4A-202ENST00000316673 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
HNF4A-202ENST00000316673 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
HNF4A-202ENST00000316673 ADRA2BP18089 450 aa19.74■□□□□ 0.75
HNF4A-202ENST00000316673 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
HNF4A-202ENST00000316673 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
HNF4A-202ENST00000316673 ELL2O00472 640 aaPredicted RBP19.73■□□□□ 0.75
HNF4A-202ENST00000316673 GNPATO15228 680 aa19.73■□□□□ 0.75
HNF4A-202ENST00000316673 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
HNF4A-202ENST00000316673 SSFA2P28290 1259 aa19.73■□□□□ 0.75
HNF4A-202ENST00000316673 INTS5Q6P9B9 1019 aaKnown RBP19.73■□□□□ 0.75
HNF4A-202ENST00000316673 IL6STP40189 918 aaPredicted RBP19.73■□□□□ 0.75
HNF4A-202ENST00000316673 TSPYL6Q8N831 410 aa19.73■□□□□ 0.75
HNF4A-202ENST00000316673 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
HNF4A-202ENST00000316673 VAMP4O75379 141 aa19.72■□□□□ 0.75
HNF4A-202ENST00000316673 ZNF827Q17R98 1081 aa19.72■□□□□ 0.75
HNF4A-202ENST00000316673 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
HNF4A-202ENST00000316673 DBF4Q9UBU7 674 aaPredicted RBP19.72■□□□□ 0.75
HNF4A-202ENST00000316673 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
HNF4A-202ENST00000316673 LRP5O75197 1615 aa19.71■□□□□ 0.75
HNF4A-202ENST00000316673 A0A087WZG4 1122 aa19.71■□□□□ 0.75
HNF4A-202ENST00000316673 A1BGP04217 495 aa19.71■□□□□ 0.75
HNF4A-202ENST00000316673 MS4A1P11836 297 aa19.71■□□□□ 0.75
HNF4A-202ENST00000316673 CANXP27824 592 aaKnown RBP19.71■□□□□ 0.75
HNF4A-202ENST00000316673 STK31Q9BXU1 1019 aa19.71■□□□□ 0.75
HNF4A-202ENST00000316673 ALDH1L2Q3SY69 923 aa19.7■□□□□ 0.74
HNF4A-202ENST00000316673 TRAPPC3LQ5T215 181 aa19.7■□□□□ 0.74
HNF4A-202ENST00000316673 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
HNF4A-202ENST00000316673 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
HNF4A-202ENST00000316673 UBR3Q6ZT12 1888 aa19.7■□□□□ 0.74
HNF4A-202ENST00000316673 PSDA5PKW4 1024 aaPredicted RBP19.69■□□□□ 0.74
HNF4A-202ENST00000316673 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
HNF4A-202ENST00000316673 HYPKQ9NX55 129 aa19.69■□□□□ 0.74
HNF4A-202ENST00000316673 RARSP54136 660 aaKnown RBP19.68■□□□□ 0.74
HNF4A-202ENST00000316673 CACNA1FO60840 1977 aa19.68■□□□□ 0.74
HNF4A-202ENST00000316673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.67■□□□□ 0.74
HNF4A-202ENST00000316673 NBPF26B4DH59 902 aa19.67■□□□□ 0.74
HNF4A-202ENST00000316673 NBPF10Q6P3W6 841 aaKnown RBP19.67■□□□□ 0.74
HNF4A-202ENST00000316673 NBPF15Q8N660 670 aa19.67■□□□□ 0.74
HNF4A-202ENST00000316673 CHPF2Q9P2E5 772 aa19.67■□□□□ 0.74
HNF4A-202ENST00000316673 COL15A1P39059 1388 aa19.67■□□□□ 0.74
HNF4A-202ENST00000316673 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
HNF4A-202ENST00000316673 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
HNF4A-202ENST00000316673 IPO8O15397 1037 aaKnown RBP19.66■□□□□ 0.74
HNF4A-202ENST00000316673 MYL6BP14649 208 aa19.66■□□□□ 0.74
HNF4A-202ENST00000316673 RFC4P35249 363 aa19.66■□□□□ 0.74
HNF4A-202ENST00000316673 PDIA6Q15084 440 aa19.66■□□□□ 0.74
HNF4A-202ENST00000316673 ZNF330Q9Y3S2 320 aaPredicted RBP19.66■□□□□ 0.74
HNF4A-202ENST00000316673 PNPLA7Q6ZV29 1317 aa19.66■□□□□ 0.74
HNF4A-202ENST00000316673 RGL2O15211 777 aa19.65■□□□□ 0.74
HNF4A-202ENST00000316673 PHF14O94880 888 aa19.65■□□□□ 0.74
HNF4A-202ENST00000316673 SLC16A10Q8TF71 515 aa19.65■□□□□ 0.74
HNF4A-202ENST00000316673 SMC4Q9NTJ3 1288 aa19.65■□□□□ 0.74
HNF4A-202ENST00000316673 ZPR1O75312 459 aa19.64■□□□□ 0.73
HNF4A-202ENST00000316673 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
HNF4A-202ENST00000316673 R3HDM1Q15032 1099 aaKnown RBP19.64■□□□□ 0.73
HNF4A-202ENST00000316673 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.73
HNF4A-202ENST00000316673 TUBGCP6Q96RT7 1819 aa19.64■□□□□ 0.73
HNF4A-202ENST00000316673 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
HNF4A-202ENST00000316673 PPP4R2Q9NY27 417 aa19.63■□□□□ 0.73
HNF4A-202ENST00000316673 MSH5O43196 834 aa19.62■□□□□ 0.73
HNF4A-202ENST00000316673 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
HNF4A-202ENST00000316673 KIF6Q6ZMV9 814 aa19.62■□□□□ 0.73
HNF4A-202ENST00000316673 DZIP3Q86Y13 1208 aaKnown RBP19.62■□□□□ 0.73
HNF4A-202ENST00000316673 COL23A1Q86Y22 540 aaPredicted RBP19.62■□□□□ 0.73
HNF4A-202ENST00000316673 NARFQ9UHQ1 456 aa19.62■□□□□ 0.73
HNF4A-202ENST00000316673 BCAR3O75815 825 aa19.61■□□□□ 0.73
HNF4A-202ENST00000316673 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
HNF4A-202ENST00000316673 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
HNF4A-202ENST00000316673 PROSER3Q2NL68 480 aa19.61■□□□□ 0.73
HNF4A-202ENST00000316673 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms