RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
BRD3-201ENST00000303407 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 CBFA2T2O43439 604 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 OFD1O75665 1012 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 MEIS3Q99687 375 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 ANKRD24Q8TF21 1146 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
BRD3-201ENST00000303407 A0A087WZG4 1122 aa19.22■□□□□ 0.67
BRD3-201ENST00000303407 GCC2Q8IWJ2 1684 aa19.22■□□□□ 0.67
BRD3-201ENST00000303407 ABCC2Q92887 1545 aa19.22■□□□□ 0.67
BRD3-201ENST00000303407 SETQ01105 290 aaPredicted RBP19.22■□□□□ 0.67
BRD3-201ENST00000303407 PER1O15534 1290 aaPredicted RBP19.22■□□□□ 0.67
BRD3-201ENST00000303407 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
BRD3-201ENST00000303407 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
BRD3-201ENST00000303407 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
BRD3-201ENST00000303407 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
BRD3-201ENST00000303407 PPFIBP1Q86W92 1011 aa19.21■□□□□ 0.67
BRD3-201ENST00000303407 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
BRD3-201ENST00000303407 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
BRD3-201ENST00000303407 HMGB1P09429 215 aaKnown RBP19.2■□□□□ 0.66
BRD3-201ENST00000303407 UQCRHLA0A096LP55 91 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 KRT18P05783 430 aaKnown RBP19.2■□□□□ 0.66
BRD3-201ENST00000303407 UQCRHP07919 91 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 HSP90B2PQ58FF3 399 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 SDSP20132 328 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
BRD3-201ENST00000303407 SOGA3Q5TF21 947 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
BRD3-201ENST00000303407 RLBP1P12271 317 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 ABCF2Q9UG63 623 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 CHPF2Q9P2E5 772 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 GJB2P29033 226 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 ZSCAN30Q86W11 494 aa19.19■□□□□ 0.66
BRD3-201ENST00000303407 STIM1Q13586 685 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
BRD3-201ENST00000303407 ANXA1P04083 346 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 CCDC112Q8NEF3 446 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 SMTNL1A8MU46 457 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 ZBTB3Q9H5J0 574 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
BRD3-201ENST00000303407 CT47A1Q5JQC4 288 aaPredicted RBP19.17■□□□□ 0.66
BRD3-201ENST00000303407 BAG4O95429 457 aaKnown RBP19.17■□□□□ 0.66
BRD3-201ENST00000303407 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
BRD3-201ENST00000303407 ATP5J2-PTCD1G3V325 749 aa19.17■□□□□ 0.66
BRD3-201ENST00000303407 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
BRD3-201ENST00000303407 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
BRD3-201ENST00000303407 NPATQ14207 1427 aa19.17■□□□□ 0.66
BRD3-201ENST00000303407 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 MAGI3Q5TCQ9 1506 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 GUCY1B3Q02153 619 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 ZNHIT6Q9NWK9 470 aaKnown RBP19.16■□□□□ 0.66
BRD3-201ENST00000303407 CEP131Q9UPN4 1083 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 HSP90AB3PQ58FF7 597 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
BRD3-201ENST00000303407 ERCC4Q92889 916 aaPredicted RBP19.16■□□□□ 0.66
BRD3-201ENST00000303407 ANKRD18BA2A2Z9 1011 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 CWC25Q9NXE8 425 aaPredicted RBP19.15■□□□□ 0.66
BRD3-201ENST00000303407 GOLIM4O00461 696 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 MTHFSDQ2M296 383 aaKnown RBP19.15■□□□□ 0.66
BRD3-201ENST00000303407 NAPBQ9H115 298 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 GDPD2Q9HCC8 539 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 ZNF213O14771 459 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 C8orf76Q96K31 380 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 STX6O43752 255 aa19.15■□□□□ 0.66
BRD3-201ENST00000303407 ATP7AQ04656 1500 aa19.14■□□□□ 0.66
BRD3-201ENST00000303407 SLC5A1P13866 664 aa19.14■□□□□ 0.66
BRD3-201ENST00000303407 PDE1AP54750 535 aa19.14■□□□□ 0.66
BRD3-201ENST00000303407 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.65
BRD3-201ENST00000303407 CAVIN4Q5BKX8 364 aa19.14■□□□□ 0.65
BRD3-201ENST00000303407 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
BRD3-201ENST00000303407 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
BRD3-201ENST00000303407 JARID2Q92833 1246 aaPredicted RBP19.14■□□□□ 0.65
BRD3-201ENST00000303407 VAMP4O75379 141 aa19.14■□□□□ 0.65
BRD3-201ENST00000303407 YTHDC2Q9H6S0 1430 aaKnown RBP19.14■□□□□ 0.65
BRD3-201ENST00000303407 CCT2P78371 535 aaKnown RBP19.13■□□□□ 0.65
BRD3-201ENST00000303407 MAP3K12Q12852 859 aa19.13■□□□□ 0.65
BRD3-201ENST00000303407 FAM177A1Q8N128 213 aaPredicted RBP19.13■□□□□ 0.65
BRD3-201ENST00000303407 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
BRD3-201ENST00000303407 RBM5P52756 815 aaKnown RBP eCLIP19.13■□□□□ 0.65
BRD3-201ENST00000303407 PRM3Q9NNZ6 103 aa19.13■□□□□ 0.65
BRD3-201ENST00000303407 GPTP24298 496 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
BRD3-201ENST00000303407 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
BRD3-201ENST00000303407 ESYT1Q9BSJ8 1104 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 ZHX3Q9H4I2 956 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 ANO10Q9NW15 660 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
BRD3-201ENST00000303407 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms