RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 HSPA4P34932 840 aa16.03■□□□□ 0.16
SLC28A1-201ENST00000286749 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
SLC28A1-201ENST00000286749 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
SLC28A1-201ENST00000286749 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
SLC28A1-201ENST00000286749 CCDC39Q9UFE4 941 aa16.03■□□□□ 0.16
SLC28A1-201ENST00000286749 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
SLC28A1-201ENST00000286749 SURF6O75683 361 aaKnown RBP16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 DIP2AQ14689 1571 aa16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 NWD1Q149M9 1564 aa16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 AMOTL2Q9Y2J4 779 aa16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
SLC28A1-201ENST00000286749 NLRP6P59044 892 aa16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 TERF1P54274 439 aa16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
SLC28A1-201ENST00000286749 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SLC28A1-201ENST00000286749 HOXC9P31274 260 aa16■□□□□ 0.15
SLC28A1-201ENST00000286749 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
SLC28A1-201ENST00000286749 MCM5P33992 734 aa16■□□□□ 0.15
SLC28A1-201ENST00000286749 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
SLC28A1-201ENST00000286749 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
SLC28A1-201ENST00000286749 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SLC28A1-201ENST00000286749 RAD50Q92878 1312 aa15.99■□□□□ 0.15
SLC28A1-201ENST00000286749 SGSM2O43147 1006 aa15.99■□□□□ 0.15
SLC28A1-201ENST00000286749 POLA2Q14181 598 aa15.99■□□□□ 0.15
SLC28A1-201ENST00000286749 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
SLC28A1-201ENST00000286749 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 EPB41L2O43491 1005 aaKnown RBP15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 PHF14O94880 888 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 PTMAP06454 111 aaKnown RBP15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 LARP6Q9BRS8 491 aaKnown RBP15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 PDCL3Q9H2J4 239 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 TPRNQ4KMQ1 711 aa15.98■□□□□ 0.15
SLC28A1-201ENST00000286749 NBPF7P0C2Y1 421 aaPredicted RBP15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 AK2P54819 239 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 TTC14Q96N46 770 aa15.97■□□□□ 0.15
SLC28A1-201ENST00000286749 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
SLC28A1-201ENST00000286749 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
SLC28A1-201ENST00000286749 UQCRHLA0A096LP55 91 aa15.96■□□□□ 0.14
SLC28A1-201ENST00000286749 UQCRHP07919 91 aa15.96■□□□□ 0.14
SLC28A1-201ENST00000286749 CWC27Q6UX04 472 aaKnown RBP15.96■□□□□ 0.14
SLC28A1-201ENST00000286749 SETD1BQ9UPS6 1966 aaKnown RBP15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 ZSCAN22P10073 491 aaPredicted RBP15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 RUFY3Q7L099 469 aa15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 TMEM87AQ8NBN3 555 aa15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 CRYBG1Q9Y4K1 1723 aa15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.95■□□□□ 0.14
SLC28A1-201ENST00000286749 CPA1P15085 419 aa15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 LIMCH1Q9UPQ0 1083 aa15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 LTN1O94822 1766 aa15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 CCDC183Q5T5S1 534 aa15.94■□□□□ 0.14
SLC28A1-201ENST00000286749 STX6O43752 255 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 SYT1P21579 422 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 MPNDQ8N594 471 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 ABTB2Q8N961 1025 aa15.93■□□□□ 0.14
SLC28A1-201ENST00000286749 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 USP25Q9UHP3 1055 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 DTNBO60941 627 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 LARGE1O95461 756 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 ANXA1P04083 346 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 KIAA2012Q0VF49 1180 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
SLC28A1-201ENST00000286749 CEMIPQ8WUJ3 1361 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 FIBPO43427 364 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 F13A1P00488 732 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 DIAPH3Q9NSV4 1193 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 UBE2HP62256 183 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms