RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
SGPP1-201ENST00000247225 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
SGPP1-201ENST00000247225 ADCK5Q3MIX3 580 aa20.24■□□□□ 0.83
SGPP1-201ENST00000247225 CCDC183Q5T5S1 534 aa20.24■□□□□ 0.83
SGPP1-201ENST00000247225 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
SGPP1-201ENST00000247225 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
SGPP1-201ENST00000247225 HS1BP3Q53T59 392 aa20.23■□□□□ 0.83
SGPP1-201ENST00000247225 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
SGPP1-201ENST00000247225 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
SGPP1-201ENST00000247225 KCNQ3O43525 872 aa20.23■□□□□ 0.83
SGPP1-201ENST00000247225 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
SGPP1-201ENST00000247225 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 PDRG1Q9NUG6 133 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
SGPP1-201ENST00000247225 PTH1RQ03431 593 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 CPS1P31327 1500 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
SGPP1-201ENST00000247225 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
SGPP1-201ENST00000247225 IFT172Q9UG01 1749 aa20.21■□□□□ 0.83
SGPP1-201ENST00000247225 CUL4AQ13619 759 aa20.21■□□□□ 0.83
SGPP1-201ENST00000247225 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
SGPP1-201ENST00000247225 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
SGPP1-201ENST00000247225 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
SGPP1-201ENST00000247225 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 LMTK2Q8IWU2 1503 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 ARAP3Q8WWN8 1544 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 RGS12O14924 1447 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 NDUFB9Q9Y6M9 179 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 DYNC1I1O14576 645 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 FGD1P98174 961 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 ABTB2Q8N961 1025 aa20.2■□□□□ 0.82
SGPP1-201ENST00000247225 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
SGPP1-201ENST00000247225 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 OSBPL3Q9H4L5 887 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
SGPP1-201ENST00000247225 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 LUZP1Q86V48 1076 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 F13A1P00488 732 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 HSPA4P34932 840 aa20.19■□□□□ 0.82
SGPP1-201ENST00000247225 NPHP1O15259 732 aa20.18■□□□□ 0.82
SGPP1-201ENST00000247225 MPRIPQ6WCQ1 1025 aa20.18■□□□□ 0.82
SGPP1-201ENST00000247225 AACSQ86V21 672 aa20.18■□□□□ 0.82
SGPP1-201ENST00000247225 KLHDC4Q8TBB5 520 aa20.18■□□□□ 0.82
SGPP1-201ENST00000247225 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
SGPP1-201ENST00000247225 INTS4Q96HW7 963 aaKnown RBP20.18■□□□□ 0.82
SGPP1-201ENST00000247225 A0A087WWV3 80 aa20.17■□□□□ 0.82
SGPP1-201ENST00000247225 CHAF1AQ13111 956 aaPredicted RBP20.17■□□□□ 0.82
SGPP1-201ENST00000247225 CLASRPQ8N2M8 674 aaKnown RBP20.17■□□□□ 0.82
SGPP1-201ENST00000247225 PIK3C2BO00750 1634 aa20.17■□□□□ 0.82
SGPP1-201ENST00000247225 SGSM2O43147 1006 aa20.17■□□□□ 0.82
SGPP1-201ENST00000247225 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
SGPP1-201ENST00000247225 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
SGPP1-201ENST00000247225 C16orf45Q96MC5 204 aaPredicted RBP20.17■□□□□ 0.82
SGPP1-201ENST00000247225 SIGLEC1Q9BZZ2 1709 aa20.17■□□□□ 0.82
SGPP1-201ENST00000247225 PTGS1P23219 599 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 UBE2HP62256 183 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 LRRC2Q9BYS8 371 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 EDC3Q96F86 508 aaKnown RBP20.16■□□□□ 0.82
SGPP1-201ENST00000247225 TRIM5Q9C035 493 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 CYP46A1Q9Y6A2 500 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
SGPP1-201ENST00000247225 KDM4AO75164 1064 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 KIF3AQ9Y496 699 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 RAB11FIP3O75154 756 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 HSP90B1P14625 803 aaKnown RBP20.15■□□□□ 0.82
SGPP1-201ENST00000247225 ANAPC15P60006 121 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 TEFQ10587 303 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 LRMPQ12912 555 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 KIF1BPQ96EK5 621 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 AP5Z1O43299 807 aa20.15■□□□□ 0.82
SGPP1-201ENST00000247225 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
SGPP1-201ENST00000247225 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.82
SGPP1-201ENST00000247225 MCM5P33992 734 aa20.14■□□□□ 0.82
SGPP1-201ENST00000247225 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.82
SGPP1-201ENST00000247225 MAP7D2Q96T17 732 aa20.14■□□□□ 0.81
SGPP1-201ENST00000247225 ATP6V1DQ9Y5K8 247 aa20.14■□□□□ 0.81
SGPP1-201ENST00000247225 LIG1P18858 919 aa20.14■□□□□ 0.81
SGPP1-201ENST00000247225 HDGFP51858 240 aaKnown RBP20.13■□□□□ 0.81
SGPP1-201ENST00000247225 NRBP1Q9UHY1 535 aa20.13■□□□□ 0.81
SGPP1-201ENST00000247225 ME3Q16798 604 aa20.13■□□□□ 0.81
SGPP1-201ENST00000247225 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
SGPP1-201ENST00000247225 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 KIF24Q5T7B8 1368 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 CCDC186Q7Z3E2 898 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
SGPP1-201ENST00000247225 LSG1Q9H089 658 aaKnown RBP20.12■□□□□ 0.81
SGPP1-201ENST00000247225 DACT1Q9NYF0 836 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
SGPP1-201ENST00000247225 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.12■□□□□ 0.81
SGPP1-201ENST00000247225 V9GYY5 206 aaPredicted RBP20.12■□□□□ 0.81
SGPP1-201ENST00000247225 HECW2Q9P2P5 1572 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms