RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SEC24BO95487 1268 aa10.01□□□□□ -0.81
SPARC-201ENST00000231061 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
SPARC-201ENST00000231061 BECN1Q14457 450 aa10.01□□□□□ -0.81
SPARC-201ENST00000231061 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
SPARC-201ENST00000231061 HELBQ8NG08 1087 aaPredicted RBP10.01□□□□□ -0.81
SPARC-201ENST00000231061 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
SPARC-201ENST00000231061 RSPH14Q9UHP6 348 aa10.01□□□□□ -0.81
SPARC-201ENST00000231061 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
SPARC-201ENST00000231061 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
SPARC-201ENST00000231061 ADGRB3O60242 1522 aa10□□□□□ -0.81
SPARC-201ENST00000231061 CCDC189A1A4V9 331 aa10□□□□□ -0.81
SPARC-201ENST00000231061 CCDC66A2RUB6 948 aa10□□□□□ -0.81
SPARC-201ENST00000231061 CTAGE5O15320 804 aa10□□□□□ -0.81
SPARC-201ENST00000231061 TAF4BQ92750 862 aa10□□□□□ -0.81
SPARC-201ENST00000231061 TSR2Q969E8 191 aaKnown RBP10□□□□□ -0.81
SPARC-201ENST00000231061 NRBP1Q9UHY1 535 aa10□□□□□ -0.81
SPARC-201ENST00000231061 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
SPARC-201ENST00000231061 PPP1R12AO14974 1030 aaPredicted RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 RANBP17Q9H2T7 1088 aaKnown RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 RWDD1Q9H446 243 aaPredicted RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 RAPGEF3O95398 923 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 CDC37L1Q7L3B6 337 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 C11orf96Q7Z7L8 435 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 KIDINS220Q9ULH0 1771 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 INF2Q27J81 1249 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 HSP90AB2PQ58FF8 381 aa9.99□□□□□ -0.81
SPARC-201ENST00000231061 ZNF396Q96N95 335 aaPredicted RBP9.99□□□□□ -0.81
SPARC-201ENST00000231061 KLHL33A6NCF5 533 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
SPARC-201ENST00000231061 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPARC-201ENST00000231061 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 KIF3AQ9Y496 699 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 MINK1Q8N4C8 1332 aaPredicted RBP9.98□□□□□ -0.81
SPARC-201ENST00000231061 ZC3H4Q9UPT8 1303 aaKnown RBP9.98□□□□□ -0.81
SPARC-201ENST00000231061 QRICH2Q9H0J4 1663 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 OATP04181 439 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 POGKQ9P215 609 aa9.98□□□□□ -0.81
SPARC-201ENST00000231061 UQCRHLA0A096LP55 91 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 ZRANB2O95218 330 aaKnown RBP eCLIP9.97□□□□□ -0.81
SPARC-201ENST00000231061 UQCRHP07919 91 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 APLP1P51693 650 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 CCDC15Q0P6D6 951 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 IPO5O00410 1097 aaKnown RBP9.97□□□□□ -0.81
SPARC-201ENST00000231061 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
SPARC-201ENST00000231061 IFNLR1Q8IU57 520 aaPredicted RBP9.97□□□□□ -0.81
SPARC-201ENST00000231061 ITPRIPQ8IWB1 547 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 DZIP1LQ8IYY4 767 aaKnown RBP9.97□□□□□ -0.81
SPARC-201ENST00000231061 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 SETBP1Q9Y6X0 1596 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 MYO3AQ8NEV4 1616 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 EXOSC9Q06265 439 aaKnown RBP9.97□□□□□ -0.81
SPARC-201ENST00000231061 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
SPARC-201ENST00000231061 LIG1P18858 919 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.81
SPARC-201ENST00000231061 WWC3Q9ULE0 1092 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 USP19O94966 1318 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 KIF1CO43896 1103 aaKnown RBP9.96□□□□□ -0.81
SPARC-201ENST00000231061 MVPQ14764 893 aaKnown RBP9.96□□□□□ -0.81
SPARC-201ENST00000231061 FAM184AQ8NB25 1140 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 MKL1Q969V6 931 aa9.96□□□□□ -0.81
SPARC-201ENST00000231061 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
SPARC-201ENST00000231061 IQSEC2Q5JU85 1478 aa9.96□□□□□ -0.82
SPARC-201ENST00000231061 FLT3P36888 993 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 RSPH1Q8WYR4 309 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 ADGRB1O14514 1584 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 GYS2P54840 703 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 SHPRHQ149N8 1683 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 C1orf131Q8NDD1 294 aaKnown RBP9.95□□□□□ -0.82
SPARC-201ENST00000231061 MAP3K20Q9NYL2 800 aaKnown RBP9.95□□□□□ -0.82
SPARC-201ENST00000231061 ERBB4Q15303 1308 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 IDI1Q13907 227 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 ICE2Q659A1 982 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 MNS1Q8NEH6 495 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 STAG3Q9UJ98 1225 aa9.95□□□□□ -0.82
SPARC-201ENST00000231061 NSD2O96028 1365 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 TTC19Q6DKK2 380 aaPredicted RBP9.94□□□□□ -0.82
SPARC-201ENST00000231061 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 A0A1W2PP64 1363 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
SPARC-201ENST00000231061 PRAM1Q96QH2 718 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 DUSP9Q99956 384 aaKnown RBP9.94□□□□□ -0.82
SPARC-201ENST00000231061 OGFOD1Q8N543 542 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 TRIML1Q8N9V2 468 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 KLHL23Q8NBE8 558 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 GNL3LQ9NVN8 582 aaKnown RBP9.94□□□□□ -0.82
SPARC-201ENST00000231061 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 MAGEC2Q9UBF1 373 aaPredicted RBP9.94□□□□□ -0.82
SPARC-201ENST00000231061 ABCC3O15438 1527 aa9.94□□□□□ -0.82
SPARC-201ENST00000231061 GLI2P10070 1586 aa9.93□□□□□ -0.82
SPARC-201ENST00000231061 TULP4Q9NRJ4 1543 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms