RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Wasf1Q8R5H6 559 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tnpo1Q8BFY9 898 aaKnown RBP16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Homer1Q9Z2Y3 366 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Prex2Q3LAC4 1598 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Cdan1Q8CC12 1239 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Nap1l5Q9JJF0 156 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Nphp3Q7TNH6 1325 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Usp5P56399 858 aaKnown RBP16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Ginm1Q91WR6 327 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 Top2bQ64511 1612 aa16.32■□□□□ 0.2
Stag1-206ENSMUST00000129269 1700010I14RikQ7TPG0 532 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Znhit6Q3UFB2 460 aaKnown RBP16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Rbm27Q5SFM8 1060 aaKnown RBP16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 IbspQ61711 324 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tmem87bQ8BKU8 555 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Ppfia3P60469 1194 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Lmbr1lQ9D1E5 489 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Camsap2Q8C1B1 1461 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 NppbP40753 121 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Taok3Q8BYC6 898 aa16.31■□□□□ 0.2
Stag1-206ENSMUST00000129269 Naip5Q9R016 1403 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Kcnj4P52189 445 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Rufy1Q8BIJ7 712 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Mrpl12Q9DB15 201 aaKnown RBP16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Prkg1P0C605 671 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Larp1Q6ZQ58 1072 aaKnown RBP16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Olr1Q9EQ09 363 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tubb6Q922F4 447 aa16.3■□□□□ 0.2
Stag1-206ENSMUST00000129269 Fbxo2Q80UW2 297 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tbc1d8Q9Z1A9 1134 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 PxdnQ3UQ28 1475 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 ThemisQ8BGW0 636 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 GckrQ91X44 587 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 Fam135aQ6NS59 1506 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tspyl2Q7TQI8 677 aa16.29■□□□□ 0.2
Stag1-206ENSMUST00000129269 Tom1l2Q5SRX1 507 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Rnf41Q8BH75 317 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Map4k4P97820 1233 aaKnown RBP16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Lmod1Q8BVA4 595 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Lmbr1Q9JIT0 490 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Abcd1P48410 736 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Atp7aQ64430 1491 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Traf3ip1Q149C2 625 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Pof1bQ8K4L4 587 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Large2Q5XPT3 690 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Taf7Q9R1C0 341 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Disp1Q3TDN0 1521 aa16.28■□□□□ 0.2
Stag1-206ENSMUST00000129269 Jarid2Q62315 1234 aa16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Sh3d21Q7TSG5 549 aa16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Atp6v1aP50516 617 aaKnown RBP16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Cct2P80314 535 aaKnown RBP16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 NpatQ8BMA5 1420 aa16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Sp4Q62445 782 aa16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Cep57l1Q8VDS7 400 aa16.27■□□□□ 0.2
Stag1-206ENSMUST00000129269 Ccdc173A0JLY1 547 aa16.27■□□□□ 0.19
Stag1-206ENSMUST00000129269 Nap1l2P51860 460 aa16.27■□□□□ 0.19
Stag1-206ENSMUST00000129269 2310002L09RikQ9D7L5 217 aa16.27■□□□□ 0.19
Stag1-206ENSMUST00000129269 Bcar3Q9QZK2 820 aa16.27■□□□□ 0.19
Stag1-206ENSMUST00000129269 Usp33Q8R5K2 909 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Krt85Q9Z2T6 507 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 CrklP47941 303 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Serpina10Q8R121 448 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 ParnQ8VDG3 624 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Lrrc43Q3V0L5 667 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Sh3tc1G3X9F6 1346 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Echdc1Q9D9V3 322 aa16.26■□□□□ 0.19
Stag1-206ENSMUST00000129269 Slc1a4O35874 532 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Eif4a2P10630 407 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Xrcc4Q924T3 326 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 TnmdQ9EP64 317 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Cpa2Q504N0 417 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Ercc6lQ8BHK9 1240 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Dbndd1Q9CZ00 160 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Pip4k2aO70172 405 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Q3UPC7 1272 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Arhgef1Q61210 920 aaKnown RBP16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Triml1Q8BVP1 470 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 CpvlQ9D3S9 478 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Zmynd15Q8C0R7 736 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Pm20d1Q8C165 503 aa16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Tfip11Q9ERA6 838 aaKnown RBP16.25■□□□□ 0.19
Stag1-206ENSMUST00000129269 Gas2l3Q3UWW6 683 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Fam83gQ5SWY7 812 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Nup88Q8CEC0 753 aaKnown RBP16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Rbm17Q8JZX4 405 aaKnown RBP16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Atp2b3Q0VF55 1220 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Nsrp1Q5NCR9 542 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Adgrl3Q80TS3 1537 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 Mctp1E9PV86 951 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 BC005561E9Q5E2 1589 aa16.24■□□□□ 0.19
Stag1-206ENSMUST00000129269 NefhP19246 1090 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Esco1Q69Z69 843 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 MthfsQ9D110 203 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Polr3aB2RXC6 1390 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 L3mbtl2P59178 703 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Secisbp2lQ6A098 1086 aaKnown RBP16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 PdcQ9QW08 244 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Slc4a4O88343 1079 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Snx25Q3ZT31 840 aa16.23■□□□□ 0.19
Stag1-206ENSMUST00000129269 Larp6Q8BN59 492 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms