RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Igfbp6P47880 238 aa19.65■□□□□ 0.74
Trim39-203ENSMUST00000113706 Akap11E9Q777 1895 aa19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Cfdp1O88271 295 aaKnown RBP19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Tbc1d9Q3UYK3 1264 aa19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Prkab2Q6PAM0 271 aa19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Tlr7P58681 1050 aa19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Nek4Q9Z1J2 792 aa19.64■□□□□ 0.73
Trim39-203ENSMUST00000113706 Efcab2Q9CQ46 164 aa19.63■□□□□ 0.73
Trim39-203ENSMUST00000113706 Map3k13Q1HKZ5 959 aa19.63■□□□□ 0.73
Trim39-203ENSMUST00000113706 Tiam2Q6ZPF3 1715 aa19.62■□□□□ 0.73
Trim39-203ENSMUST00000113706 Cyp46a1Q9WVK8 500 aa19.62■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ier5O89113 308 aa19.62■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ints5Q8CHT3 1018 aa19.61■□□□□ 0.73
Trim39-203ENSMUST00000113706 DaxxO35613 739 aa19.61■□□□□ 0.73
Trim39-203ENSMUST00000113706 Pdlim2Q8R1G6 349 aa19.61■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ddx54Q8K4L0 874 aaKnown RBP19.6■□□□□ 0.73
Trim39-203ENSMUST00000113706 Bicc1Q99MQ1 977 aaKnown RBP19.6■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ddx60E9PZQ1 1711 aa19.6■□□□□ 0.73
Trim39-203ENSMUST00000113706 Morc2aQ69ZX6 1030 aa19.6■□□□□ 0.73
Trim39-203ENSMUST00000113706 HellsQ60848 821 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 CenppQ9CZ92 286 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ybx3Q9JKB3 361 aaKnown RBP19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 Ttll7A4Q9F0 912 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 Slc39a6Q8C145 765 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 PappaQ8R4K8 1624 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 Mcmdc2E9Q956 681 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 Znf526Q8BI66 675 aa19.59■□□□□ 0.73
Trim39-203ENSMUST00000113706 AceP09470 1312 aa19.58■□□□□ 0.73
Trim39-203ENSMUST00000113706 Gm10093D3YYI8 482 aa19.58■□□□□ 0.72
Trim39-203ENSMUST00000113706 Hdac1O09106 482 aaKnown RBP19.58■□□□□ 0.72
Trim39-203ENSMUST00000113706 Bcar3Q9QZK2 820 aa19.57■□□□□ 0.72
Trim39-203ENSMUST00000113706 Catsper2A2ARP9 588 aa19.57■□□□□ 0.72
Trim39-203ENSMUST00000113706 Ppm1mQ8BU27 406 aa19.57■□□□□ 0.72
Trim39-203ENSMUST00000113706 Eif3aP23116 1344 aaKnown RBP19.57■□□□□ 0.72
Trim39-203ENSMUST00000113706 Col4a1P02463 1669 aa19.56■□□□□ 0.72
Trim39-203ENSMUST00000113706 Shank3Q4ACU6 1730 aa19.56■□□□□ 0.72
Trim39-203ENSMUST00000113706 Hspa2P17156 633 aa19.56■□□□□ 0.72
Trim39-203ENSMUST00000113706 Bcl11bQ99PV8 884 aa19.56■□□□□ 0.72
Trim39-203ENSMUST00000113706 Terf2O35144 541 aa19.55■□□□□ 0.72
Trim39-203ENSMUST00000113706 Slc4a10Q5DTL9 1118 aa19.55■□□□□ 0.72
Trim39-203ENSMUST00000113706 Tgfb1i1Q62219 461 aa19.55■□□□□ 0.72
Trim39-203ENSMUST00000113706 Flad1Q8R123 492 aa19.55■□□□□ 0.72
Trim39-203ENSMUST00000113706 Anapc15-psA0A140T8L6 141 aa19.54■□□□□ 0.72
Trim39-203ENSMUST00000113706 Shank2Q80Z38 1476 aa19.54■□□□□ 0.72
Trim39-203ENSMUST00000113706 Bcl2l12Q9D3J3 255 aa19.54■□□□□ 0.72
Trim39-203ENSMUST00000113706 Tceal9Q9DD24 104 aa19.54■□□□□ 0.72
Trim39-203ENSMUST00000113706 Grm8P47743 908 aa19.53■□□□□ 0.72
Trim39-203ENSMUST00000113706 Lmbr1lQ9D1E5 489 aa19.53■□□□□ 0.72
Trim39-203ENSMUST00000113706 Ppp6r3Q922D4 844 aa19.53■□□□□ 0.72
Trim39-203ENSMUST00000113706 Lrrc59Q922Q8 307 aaKnown RBP19.53■□□□□ 0.72
Trim39-203ENSMUST00000113706 Zeb2Q9R0G7 1215 aa19.53■□□□□ 0.72
Trim39-203ENSMUST00000113706 Crb1Q8VHS2 1405 aa19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Pdia3P27773 505 aaKnown RBP19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Mum1Q6DID5 682 aa19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Ptpdc1Q6NZK8 747 aa19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 GorabQ8BRM2 368 aa19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Antxr1Q9CZ52 562 aa19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Tfip11Q9ERA6 838 aaKnown RBP19.52■□□□□ 0.72
Trim39-203ENSMUST00000113706 Htatsf1Q8BGC0 757 aa19.51■□□□□ 0.71
Trim39-203ENSMUST00000113706 MypnQ5DTJ9 1315 aa19.51■□□□□ 0.71
Trim39-203ENSMUST00000113706 Zkscan2G3X952 960 aa19.51■□□□□ 0.71
Trim39-203ENSMUST00000113706 Elp1Q7TT37 1333 aaKnown RBP19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Nucb1Q02819 459 aaKnown RBP19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Kcnh4A2A5F7 1018 aa19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Ccnl1Q52KE7 532 aaKnown RBP19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Amer1Q7TS75 1132 aa19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Ccdc9Q8VC31 543 aaKnown RBP19.5■□□□□ 0.71
Trim39-203ENSMUST00000113706 Trim52Q8CDV4 233 aa19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 Q9D2X8 372 aa19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 Ankle2Q6P1H6 964 aa19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 Qtrt2B8ZXI1 415 aa19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 Hmox1P14901 289 aa19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 Nsfl1cQ9CZ44 370 aaKnown RBP19.49■□□□□ 0.71
Trim39-203ENSMUST00000113706 RestQ8VIG1 1082 aa19.48■□□□□ 0.71
Trim39-203ENSMUST00000113706 Pa2g4P50580 394 aaKnown RBP19.48■□□□□ 0.71
Trim39-203ENSMUST00000113706 CalcaP70160 136 aa19.48■□□□□ 0.71
Trim39-203ENSMUST00000113706 ApobrQ8VBT6 942 aa19.47■□□□□ 0.71
Trim39-203ENSMUST00000113706 Kat6bQ8BRB7 1872 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Tpx2A2APB8 745 aaKnown RBP19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Erbb4Q61527 1308 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Cct4P80315 539 aaKnown RBP19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Syde2E9PUP1 1314 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Abcc4E9Q236 1325 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Kiaa0232Q80U59 1396 aaKnown RBP19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Ank1Q02357 1862 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Mast2Q60592 1734 aa19.46■□□□□ 0.71
Trim39-203ENSMUST00000113706 Cap2Q9CYT6 476 aa19.46■□□□□ 0.7
Trim39-203ENSMUST00000113706 Tom1O88746 492 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 Ppip5k2Q6ZQB6 1129 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 Prune1Q8BIW1 454 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 EngaseQ8BX80 734 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 Nav1Q8CH77 1875 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 Ripor2Q80U16 1078 aa19.45■□□□□ 0.7
Trim39-203ENSMUST00000113706 NmiO35309 314 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 Sik1Q60670 779 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 Nlrp9bQ66X22 1003 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 Zbtb40Q6PCS8 1258 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 Hoxa7P02830 229 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 VgfQ0VGU4 617 aa19.44■□□□□ 0.7
Trim39-203ENSMUST00000113706 Ddx58Q6Q899 926 aa19.44■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms