RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Tmf1B9EKI3 1091 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 CenpqQ9CPQ5 267 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Tax1bp1Q3UKC1 814 aaKnown RBP8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Arhgef1Q61210 920 aaKnown RBP8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Otud6bQ8K2H2 294 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 4930548H24RikQ9D496 437 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Abcc10Q8R4P9 1501 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 PtpruB1AUH1 1446 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 InsrP15208 1372 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Casq1O09165 405 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Zkscan5Q9Z1D8 819 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Morc2aQ69ZX6 1030 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Tpm4Q6IRU2 248 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Sgsm1Q8BPQ7 1093 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Ccdc186Q8C9S4 917 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 4930519G04RikQ9CPT7 205 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 ScaperF8VQ70 1398 aaKnown RBP8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Mindy4Q3UQI9 744 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Tmem132eQ6IEE6 982 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Ccdc39Q9D5Y1 937 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 PrxO55103 1391 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Zfp597E9Q6S0 419 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Irx2P81066 474 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Hvcn1Q3U2S8 269 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 B4galnt4Q766D5 1034 aa8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 Noc3lQ8VI84 807 aaKnown RBP8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 AatfQ9JKX4 526 aaKnown RBP8.51□□□□□ -1.05
Chm-202ENSMUST00000113388 TatQ8QZR1 454 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Gm10093D3YYI8 482 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Usp35M0QWN7 1009 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Hdac1O09106 482 aaKnown RBP8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Odf2lQ9D478 642 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Znf704Q9ERQ3 566 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Gm16486A0A1D5RMD1 1434 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Ms4a1P19437 291 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Cep120Q7TSG1 988 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Mknk2Q8CDB0 459 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 KnstrnQ9D9Z1 312 aaKnown RBP8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 Dnajc10Q9DC23 793 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 DnmbpQ6TXD4 1580 aa8.5□□□□□ -1.05
Chm-202ENSMUST00000113388 HdgfP51859 237 aaKnown RBP8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Map9Q3TRR0 646 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Vil1Q62468 827 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Ccdc40Q8BI79 1192 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Armcx6Q8K3A6 301 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Ppp6r1Q7TSI3 856 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Cadps2Q8BYR5 1297 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Pmfbp1Q9WVQ0 1022 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 D430041D05RikF6ZGR6 1678 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Capn2O08529 700 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Lig3P97386 1015 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Cypt2Q6P924 180 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Rbbp5Q8BX09 538 aaKnown RBP8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Ankrd49Q8VE42 238 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Calcoco1Q8CGU1 691 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Iqsec2Q5DU25 1478 aa8.49□□□□□ -1.05
Chm-202ENSMUST00000113388 Slc4a2P13808 1237 aaKnown RBP8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Zscan10Q3URR7 782 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Sbno1Q689Z5 1390 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Sema3fO88632 785 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Ppm1eQ80TL0 749 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Nlrp6Q91WS2 869 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Nlgn1Q99K10 843 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 KarsQ99MN1 595 aaKnown RBP8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Rbm33Q9CXK9 1231 aaKnown RBP8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Sipa1l1Q8C0T5 1782 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Cntnap1O54991 1385 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Kif3cO35066 796 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Mcm6P97311 821 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Slc20a2Q80UP8 656 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Armc9Q9D2I5 817 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Mmp14P53690 582 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Ddx49Q4FZF3 480 aaKnown RBP8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Tmco3Q8BH01 678 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 Pdlim2Q8R1G6 349 aa8.48□□□□□ -1.05
Chm-202ENSMUST00000113388 C5P06684 1680 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 NktrP30415 1453 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Q4VA45 678 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Bag4Q8CI61 457 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Gimap6Q8K349 305 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Tmx1Q8VBT0 278 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Pola1P33609 1465 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 GorabQ8BRM2 368 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Smc4Q8CG47 1286 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 DonsonQ9QXP4 560 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Unc13bQ9Z1N9 1602 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Psen1P49769 467 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Paxbp1P58501 919 aa8.47□□□□□ -1.05
Chm-202ENSMUST00000113388 Sh3gl3Q62421 347 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Ccdc73Q8CDM4 1066 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Emilin2Q8K482 1074 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Lrrc59Q922Q8 307 aaKnown RBP8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Cdhr2E9Q7P9 1308 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Syce3B5KM66 88 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Ptgs1P22437 602 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 CrebrfQ8CDG5 640 aaKnown RBP8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Myo1cQ9WTI7 1063 aa8.46□□□□□ -1.05
Chm-202ENSMUST00000113388 Sem1P60897 70 aa8.46□□□□□ -1.06
Chm-202ENSMUST00000113388 Prpf38aQ4FK66 312 aaKnown RBP8.46□□□□□ -1.06
Chm-202ENSMUST00000113388 NeblQ0II04 452 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms