RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Sema3fO88632 785 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Hsd3b3P26150 373 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Zbtb42Q811H0 420 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Sik2Q8CFH6 931 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Kif12Q9D2Z8 642 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Kdm2bQ6P1G2 1309 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Ino80Q6ZPV2 1559 aa10.01□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Naip7Q9JIB3 1402 aa10□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Skint5A7XUY5 1461 aa10□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Marf1Q8BJ34 1730 aaKnown RBP10□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Slc4a9E9PUP3 929 aa10□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Q6PAC4 1279 aa10□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Tns3Q5SSZ5 1440 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Abcc5Q9R1X5 1436 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 PplQ9R269 1755 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 TraipQ8VIG6 470 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Unc13bQ9Z1N9 1602 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 C3P01027 1663 aa9.99□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Adh6aE9Q5Z6 375 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Ipcef1Q5DU31 406 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Txndc2Q6P902 515 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Fbxo22Q78JE5 402 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Eno4Q8C042 619 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Znf428Q8C1M2 176 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Hyal3Q8VEI3 412 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Bag6Q9Z1R2 1154 aaKnown RBP9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Mtus2Q3UHD3 1353 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Cacna1iE9Q7P2 2199 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 UacaQ8CGB3 1411 aa9.98□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Abcc10Q8R4P9 1501 aa9.97□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 IghaA0A0A6YXW6 389 aa9.97□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Foxk2Q3UCQ1 651 aa9.97□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Map10Q8BJS7 891 aa9.97□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Plekhh2Q8C115 1491 aa9.97□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Nudt18Q3U2V3 323 aa9.96□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Zbtb7cQ8VCZ7 619 aa9.96□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Hao2Q9NYQ2 353 aa9.96□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 PalldQ9ET54 1408 aa9.96□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Rprd2Q6NXI6 1469 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Evi5lH3BKQ3 813 aa9.95□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Pde3bQ61409 1100 aa9.95□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Fkbp5Q64378 456 aa9.95□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Tnnt3Q9QZ47 272 aa9.95□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Abca8aQ8K442 1620 aa9.94□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Art1Q60935 325 aa9.94□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Laptm5Q61168 261 aa9.94□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Znf526Q8BI66 675 aa9.94□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Uggt1Q6P5E4 1551 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Efcab6Q6P1E8 1516 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Slit3Q9WVB4 1523 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 AnkarA2RT91 1465 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Gm11563B1AQ90 168 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 ArafP04627 604 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 D630036H23RikQ3UQD6 204 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Krtap4-7Q9D732 168 aa9.93□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Fyb2A2A995 729 aa9.92□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Capn5O08688 640 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Tpp2Q64514 1262 aa9.92□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Znf280cQ6P3Y5 742 aa9.92□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Bcl2l12Q9D3J3 255 aa9.92□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Ylpm1Q9R0I7 1386 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Arhgef28P97433 1693 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Bicdl1A0JNT9 577 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Fam171a2A2A699 822 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Stra8P70278 393 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Sh3d21Q7TSG5 549 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Cog6Q8R3I3 657 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Plpp6Q9D4F2 292 aa9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Ybx3Q9JKB3 361 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Dapk1Q80YE7 1442 aa9.9□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Crispld1Q8CGD2 500 aa9.9□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Havcr2Q8VIM0 281 aa9.9□□□□□ -0.82
Ccdc47-202ENSMUST00000106865 Atp7aQ64430 1491 aa9.9□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 NalcnQ8BXR5 1738 aa9.9□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 KdrP35918 1367 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Col14a1Q80X19 1797 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Csrnp3P59055 597 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Eid3Q3V124 375 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Cep120Q7TSG1 988 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Gtf2iQ9ESZ8 998 aaKnown RBP9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Rlbp1Q9Z275 317 aa9.89□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Cspp1B2RX88 1205 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Ncoa4Q5U4H9 625 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Trim47Q8C0E3 641 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Plcd3Q8K2J0 785 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Ddx54Q8K4L0 874 aaKnown RBP9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Atxn7Q8R4I1 867 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Tecpr2Q3UH45 1423 aa9.88□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Tnks1bp1P58871 1720 aa9.87□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 VirmaA2AIV2 1811 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Mcm6P97311 821 aa9.87□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Mtnr1bQ8CIQ6 364 aa9.87□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 N4bp2F8VQG7 1678 aaKnown RBP9.87□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Iqgap3F8VQ29 1632 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Tarbp1E9Q368 1579 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Hoxd8P23463 289 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Cdh15P33146 784 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Kif4P33174 1231 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Dlgap3Q6PFD5 977 aa9.86□□□□□ -0.83
Ccdc47-202ENSMUST00000106865 Tmem164Q6PHN7 296 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 138.9 ms