RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Sgsm2Q80U12 1005 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cfap69Q8BH53 942 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Vps53Q8CCB4 832 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Flad1Q8R123 492 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cog6Q8R3I3 657 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ccdc47Q9D024 483 aaKnown RBP13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Zranb2Q9R020 330 aaKnown RBP13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Klhl34A2AI76 644 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Pkd2O35245 966 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Zfp51Q3U4L8 781 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tbc1d1Q60949 1255 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ccdc155Q80VJ8 648 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Gtpbp10Q8K013 366 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Eif3cQ8R1B4 911 aaKnown RBP13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Zcchc17Q9ESX4 241 aaKnown RBP13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cfap58B2RW38 873 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 TfrcQ62351 763 aaKnown RBP13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Kdm3bQ6ZPY7 1562 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cfap157Q0VFX2 523 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ccdc162pQ0VG85 912 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Klhl23Q6GQU2 558 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Fhod1Q6P9Q4 1197 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Pip4k2bQ80XI4 416 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ccz1Q8C1Y8 480 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ccdc186Q8C9S4 917 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Stag1Q9D3E6 1258 aa13.58□□□□□ -0.24
Trim55-201ENSMUST00000029139 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ap5z1Q3U829 807 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cchcr1Q8K2I2 770 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Amotl1Q9D4H4 968 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Gm42641I6L9G2 585 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Zmym1Q3TJB1 983 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ccdc114Q3UX62 658 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Gnl3lQ6PGG6 577 aaKnown RBP13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 AtripQ8BMG1 785 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 PtprvP70289 1705 aa13.57□□□□□ -0.24
Trim55-201ENSMUST00000029139 Kansl3A2RSY1 903 aaKnown RBP13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Mtx1P47802 317 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Znf532Q6NXK2 1036 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 PrimpolQ6P1E7 537 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 HomezQ80W88 542 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 GorabQ8BRM2 368 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cluap1Q8R3P7 413 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 4930550L24RikQ99PA7 320 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Chchd3Q9CRB9 227 aaKnown RBP13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Mug2P28666 1451 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ttll12Q3UDE2 639 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ccdc33Q3ULW6 985 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Trak2Q6P9N8 913 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Mphosph10Q810V0 681 aaKnown RBP13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 TxlnbQ8VBT1 685 aa13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 Kri1Q8VDQ9 704 aaKnown RBP13.56□□□□□ -0.24
Trim55-201ENSMUST00000029139 NeblQ0II04 452 aa13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ddx49Q4FZF3 480 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ddx42Q810A7 929 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Armcx6Q8K3A6 301 aa13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Brms1Q99N20 246 aa13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 CactinQ9CS00 772 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cct2P80314 535 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Smc1aQ9CU62 1233 aaKnown RBP13.55□□□□□ -0.24
Trim55-201ENSMUST00000029139 Rap1gap2Q5SVL6 712 aaKnown RBP13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Utp14aQ640M1 767 aaKnown RBP13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Mug1P28665 1476 aa13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Lmod2Q3UHZ5 550 aa13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Neurod2Q62414 383 aa13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Filip1lQ6P6L0 1131 aa13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Wdr3Q8BHB4 942 aaKnown RBP13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 EngaseQ8BX80 734 aa13.54□□□□□ -0.24
Trim55-201ENSMUST00000029139 Siglec1Q62230 1695 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Med14A2ABV5 1459 aaKnown RBP13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cfap73J3QPZ5 306 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Srpk2O54781 681 aaKnown RBP13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Mns1Q61884 491 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Efcab8Q8C9R9 203 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Ssh3Q8K330 649 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Gdap1l1Q8VE33 370 aa13.53□□□□□ -0.24
Trim55-201ENSMUST00000029139 Cdc42bpgQ80UW5 1551 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 Bag1Q60739 355 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 LnpkQ7TQ95 425 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 Rapgef3Q8VCC8 918 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 Atp1a4Q9WV27 1032 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 Atf7ipQ7TT18 1306 aa13.52□□□□□ -0.24
Trim55-201ENSMUST00000029139 RalgapbQ8BQZ4 1484 aa13.52□□□□□ -0.25
Trim55-201ENSMUST00000029139 Erlin2Q8BFZ9 340 aa13.52□□□□□ -0.25
Trim55-201ENSMUST00000029139 Kidins220E9Q9B7 1793 aa13.52□□□□□ -0.25
Trim55-201ENSMUST00000029139 Tmem165P52875 323 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Fbxo18Q8K2I9 1042 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Dact1Q8R4A3 778 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 AmotQ8VHG2 1126 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 A0A1L1SQF0 893 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Zkscan7E9PVW1 718 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Kifc2O08672 792 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Fam184bQ0KK56 942 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 A1cfQ5YD48 595 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Bank1Q80VH0 783 aa13.51□□□□□ -0.25
Trim55-201ENSMUST00000029139 Frat1P70339 274 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Jakmip3Q5DTN8 844 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Serpinb6Q60854 378 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Spats2Q8K1N4 545 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms