RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 Kdm2bQ6P1G2 1309 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Gsdma2Q32M21 443 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ptcd1Q8C2E4 695 aaKnown RBP12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 NgdnQ9DB96 315 aaKnown RBP12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ccdc66Q6NS45 935 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Nlgn1Q99K10 843 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hs1bp3Q3TC93 395 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Rhot2Q8JZN7 620 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hdgfl1Q2VPR5 283 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Tmem67Q8BR76 992 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Gtf2a1Q99PM3 378 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Nsd3Q6P2L6 1439 aa12.17□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ddx17Q501J6 650 aaKnown RBP12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Larp6Q8BN59 492 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Cep57l1Q8VDS7 400 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Col17a1Q07563 1470 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Myd88P22366 296 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Pde4bB1AWC9 736 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Slc39a6Q8C145 765 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Tpm1P58771 284 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 SfswapQ3USH5 945 aaKnown RBP12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 OptnQ8K3K8 584 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Nlrp3Q8R4B8 1033 aa12.16□□□□□ -0.46
Traf3-201ENSMUST00000021706 Slx4ipQ9D7Y9 413 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hoxc9P09633 260 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 GckrQ91X44 587 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Cyb5rlB1AS42 316 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 ZwintQ9CQU5 252 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Gdpd2Q9ESM6 539 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ttc21aQ8C0S4 1314 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Abcc3B2RX12 1523 aa12.15□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ehmt1Q5DW34 1296 aa12.15□□□□□ -0.47
Traf3-201ENSMUST00000021706 EzrP26040 586 aaKnown RBP12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Gas2l3Q3UWW6 683 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Erc1Q99MI1 1120 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Gm32742A0A1B0GT42 1604 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 LifrP42703 1092 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Fam13bQ8K2H3 851 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Phf14Q9D4H9 881 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Echdc1Q9D9V3 322 aa12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ncbp3Q8BZR9 615 aaKnown RBP12.14□□□□□ -0.47
Traf3-201ENSMUST00000021706 Sel1lQ9Z2G6 790 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 AnkarA2RT91 1465 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Uggt2E9Q4X2 1504 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Taf3Q5HZG4 932 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Astn2Q80Z10 1352 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Trim29Q8R2Q0 587 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Rbm19Q8R3C6 952 aaKnown RBP12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Rufy2Q8R4C2 606 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Uhrf1bp1lA2RSJ4 1457 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ppp6r1Q7TSI3 856 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Efcab2Q9CQ46 164 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 NhsB1AV60 1647 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ces1hD3Z298 562 aa12.13□□□□□ -0.47
Traf3-201ENSMUST00000021706 Anapc15-psA0A140T8L6 141 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Bloc1s4Q8VED2 215 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Atp8b2P98199 1209 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 March6Q6ZQ89 909 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Cfap69Q8BH53 942 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Nup133Q8R0G9 1155 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 LratQ9JI60 231 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 PzpQ61838 1495 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Gadd45bP22339 160 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 RestQ8VIG1 1082 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Nip7Q9CXK8 180 aaKnown RBP12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Zfyve16Q80U44 1528 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Trim28Q62318 834 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Prkab2Q6PAM0 271 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Slc35g1Q8BY79 368 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Stx6Q9JKK1 255 aa12.12□□□□□ -0.47
Traf3-201ENSMUST00000021706 Pdia4P08003 638 aaKnown RBP12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ccdc43Q9CR29 222 aaKnown RBP12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Bin1O08539 588 aaKnown RBP12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Prl7d1P04769 244 aa12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Tpm4Q6IRU2 248 aa12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Pmfbp1Q9WVQ0 1022 aa12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Rcan3Q9JKK0 239 aa12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Elp1Q7TT37 1333 aaKnown RBP12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 Eif5P59325 429 aaKnown RBP12.11□□□□□ -0.47
Traf3-201ENSMUST00000021706 CenppQ9CZ92 286 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Fam135bQ9DAI6 1403 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Abca8bQ8K440 1620 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Edc3Q8K2D3 508 aaKnown RBP12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Med4Q9CQA5 270 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Kif3aP28741 701 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ccnl1Q52KE7 532 aaKnown RBP12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Mum1Q6DID5 682 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Ddx58Q6Q899 926 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Prune1Q8BIW1 454 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Abca6Q8K441 1624 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Cyp7a1Q64505 503 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Slain2Q8CI08 581 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Nsfl1cQ9CZ44 370 aaKnown RBP12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Gnat3Q3V3I2 354 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Fez1Q8K0X8 392 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 Cep55Q8BT07 462 aa12.1□□□□□ -0.47
Traf3-201ENSMUST00000021706 SelenooQ9DBC0 667 aa12.09□□□□□ -0.47
Traf3-201ENSMUST00000021706 Mlh1Q9JK91 760 aa12.09□□□□□ -0.47
Traf3-201ENSMUST00000021706 IkQ9Z1M8 557 aaKnown RBP12.09□□□□□ -0.47
Traf3-201ENSMUST00000021706 Kdm5aQ3UXZ9 1690 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms